| TERribly difficult: Searching for telomerase RNAs in Saccharomycetes M Waldl, BC Thiel, R Ochsenreiter, A Holzenleiter, JV de Araujo Oliveira, ... Genes 9 (8), 372, 2018 | 15 | 2018 |
| tRNA expression and modification landscapes, and their dynamics during zebrafish embryo development T Rappol, M Waldl, A Chugunova, IL Hofacker, A Pauli, E Vilardo Nucleic Acids Research 52 (17), 10575-10594, 2024 | 7 | 2024 |
| Investigating RNA–RNA interactions through computational and biophysical analysis T Mrozowich, SM Park, M Waldl, A Henrickson, S Tersteeg, CR Nelson, ... Nucleic Acids Research 51 (9), 4588-4601, 2023 | 7* | 2023 |
| Bi-alignments as models of incongruent evolution of RNA sequence and structure M Waldl, S Will, MT Wolfinger, IL Hofacker, PF Stadler bioRxiv, 631606, 2019 | 5 | 2019 |
| Controlling the excited-state dynamics of nuclear spin isomers using the dynamic stark effect M Waldl, M Oppel, L Gonzalez The Journal of Physical Chemistry A 120 (27), 4907-4914, 2016 | 5 | 2016 |
| Bi-alignments as models of incongruent evolution of RNA sequence and secondary structure M Waldl, S Will, MT Wolfinger, IL Hofacker, PF Stadler International Meeting on Computational Intelligence Methods for …, 2019 | 3 | 2019 |
| Modeling Kinetics of RNA RNA Interactions on Direct Paths M Waldl, IK Beckmann, S Will, IL Hofacker | 2 | 2023 |
| Exogenous Shocks Lead to Increased Responsiveness and Shifts in Sentimental Resilience in Online Discussions C Gunaratne, SK Ray, C Lourenço Alves, M Waldl Proceedings of the 2019 International Conference of The Computational Social …, 2021 | 2 | 2021 |
| 3D feasibility of 2D RNA–RNA interaction paths by stepwise folding simulations IK Beckmann, M Waldl, S Will, IL Hofacker RNA 30 (2), 113-123, 2024 | 1 | 2024 |
| Local RNA folding revisited M Waldl, T Spicher, R Lorenz, IK Beckmann, IL Hofacker, SV Löhneysen, ... Journal of Bioinformatics and Computational Biology 21 (04), 2350016, 2023 | 1 | 2023 |
| RRIkinDP: Direct Paths RNA-RNA Interaction Kinetics Model M Waldl, IK Beckmann, S Will, IL Hofacker bioRxiv, 2023.07. 28.548983, 2023 | 1 | 2023 |
| Computational Complexity, Algorithmic Scope, and Evolution LP Sidl, M Faissner, M Uhlir, CAA Velandia Huerto, M Waldl, HT Yao, ... Journal of Physics: Complexity, 2025 | | 2025 |
| A Relation between Natural Selection and Computational Complexity L Sidl, M Faissner, M Uhlir, CA Velandia-Huerto, M Waldl, HT Yao, ... | | 2024 |
| Sequence design for RNA-RNA interactions M Waldl, HT Yao, IL Hofacker RNA Design: Methods and Protocols, 1-16, 2024 | | 2024 |
| Incongruences Between Sequence and Secondary Structure Alignments of Nucleic Acids M Waldl, C Flamm, T Gatter | | |
