Wellington: a novel method for the accurate identification of digital genomic footprints from DNase-seq data J Piper, MC Elze, P Cauchy, PN Cockerill, C Bonifer, S Ott Nucleic acids research 41 (21), e201-e201, 2013 | 247 | 2013 |
Identification of individuals by trait prediction using whole-genome sequencing data C Lippert, R Sabatini, MC Maher, EY Kang, S Lee, O Arikan, A Harley, ... Proceedings of the National Academy of Sciences 114 (38), 10166-10171, 2017 | 210 | 2017 |
Fast and accurate HLA typing from short-read next-generation sequence data with xHLA C Xie, ZX Yeo, M Wong, J Piper, T Long, EF Kirkness, WH Biggs, K Bloom, ... Proceedings of the National Academy of Sciences 114 (30), 8059-8064, 2017 | 150 | 2017 |
Identification of a dynamic core transcriptional network in t (8; 21) AML that regulates differentiation block and self-renewal A Ptasinska, SA Assi, N Martinez-Soria, MR Imperato, J Piper, P Cauchy, ... Cell reports 8 (6), 1974-1988, 2014 | 145 | 2014 |
Inducible chromatin priming is associated with the establishment of immunological memory in T cells SL Bevington, P Cauchy, J Piper, E Bertrand, N Lalli, RC Jarvis, ... The EMBO journal 35 (5), 515-535, 2016 | 107 | 2016 |
Chronic FLT3-ITD signaling in acute myeloid leukemia is connected to a specific chromatin signature P Cauchy, SR James, J Zacarias-Cabeza, A Ptasinska, MR Imperato, ... Cell reports 12 (5), 821-836, 2015 | 80 | 2015 |
Wellington-bootstrap: differential DNase-seq footprinting identifies cell-type determining transcription factors J Piper, SA Assi, P Cauchy, C Ladroue, PN Cockerill, C Bonifer, S Ott BMC genomics 16, 1-8, 2015 | 49 | 2015 |
Platform for visual synthesis of genomic, microbiome, and metabolome data S Brewerton, B Coon, C Xie, R Zuniga, J De Castro, S Yooseph, W Li, ... US Patent App. 15/348,917, 2017 | 12 | 2017 |