Cikkek nyilvánosan hozzáférhető megbízással - Frank T. BergmannTovábbi információ
Sehol sem hozzáférhető: 2
Computer-aided design for synthetic biology
D Chandran, FT Bergmann, HM Sauro, D Densmore
Design and analysis of biomolecular circuits: Engineering approaches to …, 2011
Megbízások: US National Institutes of Health
Software tools for systems biology
HM Sauro, FT Bergmann
Systems Biomedicine, 289-314, 2010
Megbízások: US National Institutes of Health
Valahol hozzáférhető: 21
Reproducible computational biology experiments with SED-ML-the simulation experiment description markup language
D Waltemath, R Adams, FT Bergmann, M Hucka, F Kolpakov, AK Miller, ...
BMC systems biology 5, 1-10, 2011
Megbízások: US National Institutes of Health, German Research Foundation
TinkerCell: modular CAD tool for synthetic biology
D Chandran, FT Bergmann, HM Sauro
Journal of biological engineering 3, 1-17, 2009
Megbízások: US National Institutes of Health
Minimum information about a simulation experiment (MIASE)
D Waltemath, R Adams, DA Beard, FT Bergmann, US Bhalla, R Britten, ...
PLoS computational biology 7 (4), e1001122, 2011
Megbízások: US National Institutes of Health, German Research Foundation
COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project
FT Bergmann, R Adams, S Moodie, J Cooper, M Glont, M Golebiewski, ...
BMC bioinformatics 15, 1-9, 2014
Megbízások: US National Institutes of Health, UK Biotechnology and Biological Sciences …
Antimony: a modular model definition language
LP Smith, FT Bergmann, D Chandran, HM Sauro
Bioinformatics 25 (18), 2452-2454, 2009
Megbízások: US National Institutes of Health
COPASI and its applications in biotechnology
FT Bergmann, S Hoops, B Klahn, U Kummer, P Mendes, J Pahle, S Sahle
Journal of biotechnology 261, 215-220, 2017
Megbízások: US National Institutes of Health, UK Biotechnology and Biological Sciences …
Software support for SBGN maps: SBGN-ML and LibSBGN
MP Van Iersel, AC Villéger, T Czauderna, SE Boyd, FT Bergmann, A Luna, ...
Bioinformatics 28 (15), 2016-2021, 2012
Megbízások: US National Institutes of Health
Promoting coordinated development of community-based information standards for modeling in biology: the COMBINE initiative
M Hucka, DP Nickerson, GD Bader, FT Bergmann, J Cooper, E Demir, ...
Frontiers in bioengineering and biotechnology 3, 19, 2015
Megbízások: US National Institutes of Health, Australian Research Council, UK …
Systems biology markup language (SBML) level 2 version 5: structures and facilities for model definitions
M Hucka, FT Bergmann, A Dräger, S Hoops, SM Keating, N Le Novere, ...
Journal of integrative bioinformatics 12 (2), 731-901, 2015
Megbízások: US National Institutes of Health, European Molecular Biology Laboratory, UK …
The Systems Biology Markup Language (SBML): language specification for level 3 version 1 core
M Hucka, FT Bergmann, S Hoops, SM Keating, S Sahle, JC Schaff, ...
Journal of integrative bioinformatics 12 (2), 382-549, 2015
Megbízások: US National Institutes of Health, European Molecular Biology Laboratory, UK …
Toward community standards and software for whole-cell modeling
D Waltemath, JR Karr, FT Bergmann, V Chelliah, M Hucka, M Krantz, ...
IEEE Transactions on Biomedical Engineering 63 (10), 2007-2014, 2016
Megbízások: US National Science Foundation, US National Institutes of Health, Australian …
Computer-aided design of biological circuits using TinkerCell
D Chandran, FT Bergmann, HM Sauro
Bioengineered bugs 1 (4), 276-283, 2010
Megbízások: US National Institutes of Health
Comparing simulation results of SBML capable simulators
FT Bergmann, HM Sauro
Bioinformatics 24 (17), 1963-1965, 2008
Megbízások: US National Institutes of Health
SBtab: a flexible table format for data exchange in systems biology
T Lubitz, J Hahn, FT Bergmann, E Noor, E Klipp, W Liebermeister
Bioinformatics 32 (16), 2559-2561, 2016
Megbízások: German Research Foundation
Standards and ontologies in computational systems biology
HM Sauro, FT Bergmann
Essays in biochemistry 45, 211-222, 2008
Megbízások: US National Institutes of Health
Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)
D Waltemath, FT Bergmann, C Chaouiya, T Czauderna, P Gleeson, ...
Standards in Genomic Sciences 9, 1285-1301, 2014
Megbízások: US National Institutes of Health
SED-ML web tools: generate, modify and export standard-compliant simulation studies
FT Bergmann, D Nickerson, D Waltemath, M Scharm
Bioinformatics 33 (8), 1253-1254, 2017
Megbízások: US National Institutes of Health, Federal Ministry of Education and Research …
A profile of today's SBML-compatible software
M Hucka, FT Bergmann, SM Keating, LP Smith
2011 IEEE Seventh International Conference on e-Science Workshops, 143-150, 2011
Megbízások: US National Institutes of Health
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