| The gene ontology resource: 20 years and still GOing strong Gene Ontology Consortium Nucleic acids research 47 (D1), D330-D338, 2019 | 3993 | 2019 |
| The Gene Ontology resource: enriching a GOld mine Nucleic acids research 49 (D1), D325-D334, 2021 | 2977 | 2021 |
| WormBase 2016: expanding to enable helminth genomic research KL Howe, BJ Bolt, S Cain, J Chan, WJ Chen, P Davis, J Done, T Down, ... Nucleic acids research 44 (D1), D774-D780, 2016 | 386 | 2016 |
| WormBase: a modern model organism information resource TW Harris, V Arnaboldi, S Cain, J Chan, WJ Chen, J Cho, P Davis, S Gao, ... Nucleic acids research 48 (D1), D762-D767, 2020 | 328 | 2020 |
| A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors CA Grove, F De Masi, MI Barrasa, DE Newburger, MJ Alkema, ML Bulyk, ... Cell 138 (2), 314-327, 2009 | 318 | 2009 |
| A gene-centered C. elegans protein-DNA interaction network B Deplancke, A Mukhopadhyay, W Ao, AM Elewa, CA Grove, NJ Martinez, ... Cell 125 (6), 1193-1205, 2006 | 281 | 2006 |
| WormBase in 2022—data, processes, and tools for analyzing Caenorhabditis elegans P Davis, M Zarowiecki, V Arnaboldi, A Becerra, S Cain, J Chan, WJ Chen, ... Genetics 220 (4), iyac003, 2022 | 253 | 2022 |
| A compendium of Caenorhabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks JS Reece-Hoyes, B Deplancke, J Shingles, CA Grove, IA Hope, ... Genome biology 6, 1-12, 2005 | 252 | 2005 |
| WormBase 2012: more genomes, more data, new website K Yook, TW Harris, T Bieri, A Cabunoc, J Chan, WJ Chen, P Davis, ... Nucleic acids research 40 (D1), D735-D741, 2012 | 244 | 2012 |
| WormBase 2017: molting into a new stage RYN Lee, KL Howe, TW Harris, V Arnaboldi, S Cain, J Chan, WJ Chen, ... Nucleic acids research 46 (D1), D869-D874, 2018 | 200 | 2018 |
| WormBase 2014: new views of curated biology TW Harris, J Baran, T Bieri, A Cabunoc, J Chan, WJ Chen, P Davis, ... Nucleic acids research 42 (D1), D789-D793, 2014 | 186 | 2014 |
| Insight into transcription factor gene duplication from Caenorhabditis elegans Promoterome-driven expression patterns JS Reece-Hoyes, J Shingles, D Dupuy, CA Grove, AJM Walhout, M Vidal, ... BMC genomics 8, 1-17, 2007 | 153 | 2007 |
| Alliance of Genome Resources Portal: unified model organism research platform Nucleic acids research 48 (D1), D650-D658, 2020 | 149 | 2020 |
| Using a structural and logics systems approach to infer bHLH–DNA binding specificity determinants F De Masi, CA Grove, A Vedenko, A Alibes, SS Gisselbrecht, L Serrano, ... Nucleic acids research 39 (11), 4553-4563, 2011 | 90 | 2011 |
| WormBase 2024: status and transitioning to Alliance infrastructure PW Sternberg, K Van Auken, Q Wang, A Wright, K Yook, M Zarowiecki, ... Genetics 227 (1), iyae050, 2024 | 78 | 2024 |
| Matrix and Steiner-triple-system smart pooling assays for high-performance transcription regulatory network mapping V Vermeirssen, B Deplancke, MI Barrasa, JS Reece-Hoyes, HE Arda, ... Nature methods 4 (8), 659-664, 2007 | 75 | 2007 |
| Harmonizing model organism data in the Alliance of Genome Resources Genetics 220 (4), iyac022, 2022 | 72 | 2022 |
| Transcription factor functionality and transcription regulatory networks CA Grove, AJM Walhout Molecular BioSystems 4 (4), 309-314, 2008 | 37 | 2008 |
| Using WormBase: A Genome Biology Resource for Caenorhabditis elegans and Related Nematodes C Grove, S Cain, WJ Chen, P Davis, T Harris, KL Howe, R Kishore, R Lee, ... Eukaryotic Genomic Databases: Methods and Protocols, 399-470, 2018 | 35 | 2018 |
| Updates to the Alliance of Genome Resources central infrastructure Genetics 227 (1), iyae049, 2024 | 25 | 2024 |
