John St. John

Hivatkozott rá

	Összes	2020 óta
Hivatkozások	3159	1545
h-index	17	15
i10-index	18	17

360

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Társszerzők

Peter UlzFreenomeE-mail megerősítve itt: freenome.com
Ellen HeitzerInstitute of Human GeneticsE-mail megerősítve itt: medunigraz.at
Benedict PatenProfessor; Associate Director, UC Santa Cruz Genomics Institute, University of CaliforniaE-mail megerősítve itt: ucsc.edu
Jonathan S. WeissmanUCSF/HHMIE-mail megerősítve itt: ucsf.edu
Richard E. GreenProf of Biomolecular Engineering, UCSC, UC Santa Cruz Genomics InstituteE-mail megerősítve itt: soe.ucsc.edu
Evangelos Pazarentzos, Ph.D.AstraZenecaE-mail megerősítve itt: astrazeneca.com
Dent EarlStaff Software Engineer at Google. Formerly of UCSC, UCLA.E-mail megerősítve itt: soe.ucsc.edu
Mark DiekhansUniversity of California, Santa Cruz; UC Santa Cruz Genomics InstituteE-mail megerősítve itt: soe.ucsc.edu
David HausslerScientific Director, UC Santa Cruz Genomics Institute, University of California, Santa CruzE-mail megerősítve itt: soe.ucsc.edu
Beth ShapiroUC Santa Cruz Genomics Institute; Ecology and Evolutionary Biology, UC Santa CruzE-mail megerősítve itt: ucsc.edu
Tara FultonEnvironment and Climate Change CanadaE-mail megerősítve itt: ualberta.ca
Mathias StillerInstitute of Pathology, University Leipzig, GermanyE-mail megerősítve itt: medizin.uni-leipzig.de
Fiona McCarthyProfessor, School of Animal and Comparative Biomedical Sciences, University of ArizonaE-mail megerősítve itt: email.arizona.edu
Bruce BowermanInstitute of Molecular Biology, University of OregonE-mail megerősítve itt: uoregon.edu
Amanda ChongWellcome Centre for Human GeneticsE-mail megerősítve itt: well.ox.ac.uk
Weerachai JaratlerdsiriSchool of Medical Sciences, Faculty of Medicine & Health, University of SydneyE-mail megerősítve itt: sydney.edu.au
Travis C. GlennDept. Environmental Health Science & Institute of Bioinformatics, University of GeorgiaE-mail megerősítve itt: uga.edu
Joel ParkerUniversity of North Carolina at Chapel HillE-mail megerősítve itt: email.unc.edu

Követés

John St. John

Machine Learning Scientist @ Nvidia

E-mail megerősítve itt: nvidia.com - Kezdőlap

Machine Learning Deep Learning Computational Biology Epigenomics Cancer


Cím Rendezés hivatkozások szerint Rendezés év szerint Rendezés cím szerint	Hivatkozott rá Hivatkozott rá	Év
Assemblathon 1: a competitive assessment of de novo short read assembly methods D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ... Genome research 21 (12), 2224-2241, 2011	633	2011
Evolution and clinical impact of co-occurring genetic alterations in advanced-stage EGFR-mutant lung cancers CM Blakely, TBK Watkins, W Wu, B Gini, JJ Chabon, CE McCoach, ... Nature genetics 49 (12), 1693-1704, 2017	517	2017
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ... Science 346 (6215), 1254449, 2014	391	2014
The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage J Abramyan, D Badenhorst, KK Biggar, GM Borchert, CW Botka, ... Genome Biology 14 (3), R28, 2013	377	2013
Inference of transcription factor binding from cell-free DNA enables tumor subtype prediction and early detection P Ulz, S Perakis, Q Zhou, T Moser, J Belic, I Lazzeri, A Wölfler, A Zebisch, ... Nature communications 10 (1), 4666, 2019	224	2019
Genomic evidence for island population conversion resolves conflicting theories of polar bear evolution JA Cahill, RE Green, TL Fulton, M Stiller, F Jay, N Ovsyanikov, ... PLoS genetics 9 (3), e1003345, 2013	196	2013
Machine learning enables detection of early-stage colorectal cancer by whole-genome sequencing of plasma cell-free DNA N Wan, D Weinberg, TY Liu, K Niehaus, EA Ariazi, D Delubac, A Kannan, ... BMC cancer 19, 1-10, 2019	177	2019
Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes JA St John, EL Braun, SR Isberg, LG Miles, AY Chong, J Gongora, ... Genome Biology 13 (1), 415, 2012	163	2012
Cactus graphs for genome comparisons B Paten, M Diekhans, D Earl, JS John, J Ma, B Suh, D Haussler Journal of Computational Biology 18 (3), 469-481, 2011	141	2011
Whole genome duplications and expansion of the vertebrate GATA transcription factor gene family W Gillis, J St John, B Bowerman, S Schneider BMC evolutionary biology 9 (1), 207, 2009	66	2009
Integrated systems and methods for automated processing and analysis of biological samples, clinical information processing and clinical trial matching T Matsuguchi, AF Caulin, JAS John, S Soi, EC Ahmed, E Pazarentzos, ... US Patent App. 15/727,491, 2018	47	2018
Oncogenic activation of the PI3-kinase p110β isoform via the tumor-derived PIK3CβD1067V kinase domain mutation E Pazarentzos, P Giannikopoulos, G Hrustanovic, J St John, VR Olivas, ... Oncogene 35 (9), 1198-1205, 2016	47	2016
Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling ES Rice, S Kohno, JS John, S Pham, J Howard, LF Lareau, BL O'Connell, ... Genome research 27 (5), 686-696, 2017	46	2017
Integrated systems and methods for automated processing and analysis of biological samples, clinical information processing and clinical trial matching T Matsuguchi, JAS John, E Pazarentzos, W Polkinghorn, ... US Patent App. 15/727,501, 2018	34	2018
Comparative genome analyses reveal distinct structure in the saltwater crocodile MHC W Jaratlerdsiri, J Deakin, RM Godinez, X Shan, DG Peterson, S Marthey, ... PloS one 9 (12), e114631, 2014	27	2014
Blood-based detection of early-stage colorectal cancer using multiomics and machine learning G Putcha, TY Liu, E Ariazi, M Bertin, A Drake, M Dzamba, G Hogan, ... Abstract presented at: the American Society of Clinical Oncology (ASCO) GI …, 2020	21	2020
Cactus Graphs for Genome Comparisons B Paten, M Diekhans, D Earl, J St. John, J Ma, B Suh, D Haussler Research in Computational Molecular Biology, 410-425, 2010	17	2010
Evaluation of a sensitive blood test for the detection of colorectal advanced adenomas in a prospective cohort using a multiomics approach J Lin, E Ariazi, M Dzamba, TK Hsu, S Kothen-Hill, K Li, TY Liu, S Mahajan, ... J Clin Oncol 39, 43, 2021	10	2021
Inference of tumor cell-specific transcription factor binding from cell-free DNA enables tumor subtype prediction and early detection of cancer P Ulz, S Perakis, Q Zhou, T Moser, J Belic, I Lazzeri, A Wlfler, A Zebisch, ... bioRxiv, 2019	7	2019
Methods for Predicting EGFR Tyrosine Kinase Inhibitor Efficacy P Giannikopoulos, JS John, J Parker, T Bivona US Patent App. 14/671,213, 2016	5	2016

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