Antonio González

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Daniel McDonaldAmerican Gut, Knight Lab, Department of Pediatrics, UCSDAdresse e-mail validée de ucsd.edu
Yoshiki Vázquez-BaezaBiomeSenseAdresse e-mail validée de biomesense.com
Zhenjiang Zech Xustate key lab of food science and resources, nuAdresse e-mail validée de ucsd.edu
J Gregory CaporasoNorthern Arizona UniversityAdresse e-mail validée de nau.edu
Pieter C DorresteinUCSDAdresse e-mail validée de ucsd.edu
Se Jin SongUniversity of California San DiegoAdresse e-mail validée de ucsd.edu
Dan KnightsUniversity of MinnesotaAdresse e-mail validée de umn.edu
Jose A Navas-MolinaUniversity of California, San DiegoAdresse e-mail validée de eng.ucsd.edu
Jose C. ClementeAssociate Professor, Icahn School of Medicine at Mount SinaiAdresse e-mail validée de mssm.edu
William A WaltersPost-doc, Cornell UniversityAdresse e-mail validée de colorado.edu
Ruth E. LeyDepartment of Microbiome Science, Max Planck Institute for Biology, TübingenAdresse e-mail validée de tuebingen.mpg.de
Omry KorenProfessor, Bar Ilan University, IsraelAdresse e-mail validée de biu.ac.il
Catherine LozuponeAssociate Professor of Medicine, University of Colorado, DenverAdresse e-mail validée de ucdenver.edu
Amanda BirminghamSenior Bioinformatics Programmer; University of California, San DiegoAdresse e-mail validée de ucsd.edu
Christian L LauberNationwide Children's HospitalAdresse e-mail validée de nationwidechildrens.org
Janet K. JanssonChief Biologist, Pacific Northwest National LabAdresse e-mail validée de pnnl.gov
Noah FiererProfessor, University of Colorado at BoulderAdresse e-mail validée de colorado.edu
Jessica L. MetcalfAssociate Professor, Colorado State University, Fort Collins, COAdresse e-mail validée de colostate.edu
Will Van TreurenPhD Microbiology and Immunology, Interface BiosciencesAdresse e-mail validée de interface.bio
Luke K UrsellBiota TechnologyAdresse e-mail validée de biota.com

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Antonio González

Programmer Analyst, UC San Diego

Adresse e-mail validée de ucsd.edu - Page d'accueil

Computational Biology New Sequencing Technologies QIIME


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
QIIME allows analysis of high-throughput community sequencing data JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ... Nature methods 7 (5), 335-336, 2010	36049	2010
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019	16248	2019
Structure, function and diversity of the healthy human microbiome nature 486 (7402), 207-214, 2012	10621	2012
The treatment-naive microbiome in new-onset Crohn’s disease D Gevers, S Kugathasan, LA Denson, Y Vázquez-Baeza, W Van Treuren, ... Cell host & microbe 15 (3), 382-392, 2014	3491	2014
A framework for human microbiome research BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ... Nature 486 (7402), 215, 2012	2476*	2012
A communal catalogue reveals Earth’s multiscale microbial diversity LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ... Nature 551 (7681), 457-463, 2017	2433	2017
Host remodeling of the gut microbiome and metabolic changes during pregnancy O Koren, JK Goodrich, TC Cullender, A Spor, K Laitinen, HK Bäckhed, ... Cell 150 (3), 470-480, 2012	2270	2012
Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases J Lloyd-Price, C Arze, AN Ananthakrishnan, M Schirmer, J Avila-Pacheco, ... Nature 569 (7758), 655-662, 2019	2257	2019
Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans BD Muegge, J Kuczynski, D Knights, JC Clemente, A González, ... Science 332 (6032), 970-974, 2011	2102	2011
Normalization and microbial differential abundance strategies depend upon data characteristics S Weiss, ZZ Xu, S Peddada, A Amir, K Bittinger, A Gonzalez, C Lozupone, ... Microbiome 5, 1-18, 2017	1824	2017
Best practices for analysing microbiomes R Knight, A Vrbanac, BC Taylor, A Aksenov, C Callewaert, J Debelius, ... Nature Reviews Microbiology 16 (7), 410-422, 2018	1623	2018
Deblur rapidly resolves single-nucleotide community sequence patterns A Amir, D McDonald, JA Navas-Molina, E Kopylova, JT Morton, Z Zech Xu, ... MSystems 2 (2), 10.1128/msystems. 00191-16, 2017	1473	2017
Using QIIME to analyze 16S rRNA gene sequences from microbial communities J Kuczynski, J Stombaugh, WA Walters, A González, JG Caporaso, ... Current protocols in microbiology 27 (1), 1E. 5.1-1E. 5.20, 2012	1396	2012
Moving pictures of the human microbiome JG Caporaso, CL Lauber, EK Costello, D Berg-Lyons, A Gonzalez, ... Genome biology 12, 1-8, 2011	1350	2011
EMPeror: a tool for visualizing high-throughput microbial community data Y Vázquez-Baeza, M Pirrung, A Gonzalez, R Knight Gigascience 2 (1), 2047-217X-2-16, 2013	1292	2013
Dynamics of the human gut microbiome in inflammatory bowel disease J Halfvarson, CJ Brislawn, R Lamendella, Y Vázquez-Baeza, WA Walters, ... Nature microbiology 2 (5), 1-7, 2017	1161	2017
Partial restoration of the microbiota of cesarean-born infants via vaginal microbial transfer MG Dominguez-Bello, KM De Jesus-Laboy, N Shen, LM Cox, A Amir, ... Nature medicine 22 (3), 250-253, 2016	1099	2016
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ... PeerJ Preprints, 2018	1005	2018
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ... Nature biotechnology 29 (5), 415-420, 2011	753	2011
Microbiota and Host Nutrition across Plant and Animal Kingdoms S Hacquard, R Garrido-Oter, A González, S Spaepen, G Ackermann, ... Cell Host & Microbe 17 (5), 603-616, 2015	733	2015

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