Jesse RR Zaneveld

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Rebecca Vega ThurberDistinguished Professor of Microbiology Oregon State UniversityAdresse e-mail validée de oregonstate.edu
Dan KnightsUniversity of MinnesotaAdresse e-mail validée de umn.edu
Catherine LozuponeAssociate Professor of Medicine, University of Colorado, DenverAdresse e-mail validée de ucdenver.edu
Ryan McMindsUniversity of South FloridaAdresse e-mail validée de usf.edu
Daniel McDonaldAmerican Gut, Knight Lab, Department of Pediatrics, UCSDAdresse e-mail validée de ucsd.edu
Deron BurkepileProfessor - Ecology, Evolution, & Marine Biology - University of California, Santa BarbaraAdresse e-mail validée de lifesci.ucsb.edu
Curtis HuttenhowerDepartment of Biostatistics, Harvard School of Public HealthAdresse e-mail validée de hsph.harvard.edu
Morgan LangilleProfessor, Dalhousie UniversityAdresse e-mail validée de dal.ca
J Gregory CaporasoNorthern Arizona UniversityAdresse e-mail validée de nau.edu
Rob BeikoAssociate Professor of Computer Science, Dalhousie UniversityAdresse e-mail validée de dal.ca
Rory WelshUS Centers for Disease Control and PreventionAdresse e-mail validée de cdc.gov
Noah FiererProfessor, University of Colorado at BoulderAdresse e-mail validée de colorado.edu
Ruth E. LeyDepartment of Microbiome Science, Max Planck Institute for Biology, TübingenAdresse e-mail validée de tuebingen.mpg.de
Laura Wegener ParfreyAssociate Professor, University of British ColumbiaAdresse e-mail validée de botany.ubc.ca
Federico E. ReyUniversity of Wisconsin-MadisonAdresse e-mail validée de wisc.edu
Peter TurnbaughUniversity of California, San FranciscoAdresse e-mail validée de ucsf.edu

Suivre

Jesse RR Zaneveld

Associate Professor, Division of Biological Sciences, University of Washington, Bothell

Adresse e-mail validée de uw.edu

Microbial Ecology Bioinformatics Coral Genome Evolution Phylogenetic prediction


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
QIIME allows analysis of high-throughput community sequencing data JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ... Nature methods 7 (5), 335-336, 2010	36042	2010
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019	17117	2019
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences MGI Langille, J Zaneveld, JG Caporaso, D McDonald, D Knights, ... Nature biotechnology 31 (9), 814-821, 2013	8904	2013
PICRUSt2 for prediction of metagenome functions GM Douglas, VJ Maffei, JR Zaneveld, SN Yurgel, JR Brown, CM Taylor, ... Nature biotechnology 38 (6), 685-688, 2020	4453*	2020
A communal catalogue reveals Earth’s multiscale microbial diversity LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ... Nature, 2017	2432	2017
Normalization and microbial differential abundance strategies depend upon data characteristics S Weiss, ZZ Xu, S Peddada, A Amir, K Bittinger, A Gonzalez, C Lozupone, ... Microbiome 5, 1-18, 2017	1987	2017
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients N Fierer, CL Lauber, KS Ramirez, J Zaneveld, MA Bradford, R Knight The ISME journal 6 (5), 1007-1017, 2012	1778	2012
Best practices for analysing microbiomes R Knight, A Vrbanac, BC Taylor, A Aksenov, C Callewaert, J Debelius, ... Nature Reviews Microbiology 16 (7), 410-422, 2018	1620	2018
Bayesian community-wide culture-independent microbial source tracking D Knights, J Kuczynski, ES Charlson, J Zaneveld, MC Mozer, RG Collman, ... Nature methods 8 (9), 761-763, 2011	1580	2011
Stress and stability: applying the Anna Karenina principle to animal microbiomes JR Zaneveld, R McMinds, R Vega Thurber Nature Microbiology, 2017	824	2017
Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales JR Zaneveld, DE Burkepile, AA Shantz, CE Pritchard, R McMinds, ... Nature communications 7 (1), 1-12, 2016	548	2016
Chronic nutrient enrichment increases prevalence and severity of coral disease and bleaching RL Vega Thurber, DE Burkepile, C Fuchs, AA Shantz, R McMinds, ... Global change biology 20 (2), 544-554, 2014	546	2014
Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny FJ Pollock, R McMinds, S Smith, DG Bourne, BL Willis, M Medina, ... Nature communications 9 (1), 4921, 2018	333	2018
Natural volcanic CO₂ seeps reveal future trajectories for host–microbial associations in corals and sponges KM Morrow, DG Bourne, C Humphrey, ES Botté, P Laffy, J Zaneveld, ... The ISME journal 9 (4), 894-908, 2015	283	2015
Pan-genome of the dominant human gut-associated archaeon, Methanobrevibacter smithii, studied in twins EE Hansen, CA Lozupone, FE Rey, M Wu, JL Guruge, A Narra, ... Proceedings of the National Academy of Sciences 108 (supplement_1), 4599-4606, 2011	268	2011
One health relationships between human, animal, and environmental microbiomes: a mini-review P Trinh, JR Zaneveld, S Safranek, PM Rabinowitz Frontiers in public health 6, 235, 2018	211	2018
Direct sequencing of the human microbiome readily reveals community differences J Kuczynski, EK Costello, DR Nemergut, J Zaneveld, CL Lauber, ... Genome biology 11, 1-9, 2010	200	2010
Identifying genomic and metabolic features that can underlie early successional and opportunistic lifestyles of human gut symbionts C Lozupone, K Faust, J Raes, JJ Faith, DN Frank, J Zaneveld, JI Gordon, ... Genome Research, 2012	194	2012
Human-associated microbial signatures: examining their predictive value D Knights, LW Parfrey, J Zaneveld, C Lozupone, R Knight Cell host & microbe 10 (4), 292-296, 2011	178	2011
Host-bacterial coevolution and the search for new drug targets J Zaneveld, PJ Turnbaugh, C Lozupone, RE Ley, M Hamady, JI Gordon, ... Current opinion in chemical biology 12 (1), 109-114, 2008	134	2008

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