| Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets EZ Macosko, A Basu, R Satija, J Nemesh, K Shekhar, M Goldman, I Tirosh, ... Cell 161 (5), 1202-1214, 2015 | 7312 | 2015 |
| Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors AC Villani, R Satija, G Reynolds, S Sarkizova, K Shekhar, J Fletcher, ... Science 356 (6335), eaah4573, 2017 | 2345 | 2017 |
| A single-cell survey of the small intestinal epithelium AL Haber, M Biton, N Rogel, RH Herbst, K Shekhar, C Smillie, G Burgin, ... Nature 551 (7680), 333-339, 2017 | 1522 | 2017 |
| Comprehensive classification of retinal bipolar neurons by single-cell transcriptomics K Shekhar, SW Lapan, IE Whitney, NM Tran, EZ Macosko, M Kowalczyk, ... Cell 166 (5), 1308-1323. e30, 2016 | 1158 | 2016 |
| Molecular, spatial, and functional single-cell profiling of the hypothalamic preoptic region JR Moffitt, D Bambah-Mukku, SW Eichhorn, E Vaughn, K Shekhar, ... Science 362 (6416), eaau5324, 2018 | 999 | 2018 |
| Massively parallel single-nucleus RNA-seq with DroNc-seq N Habib, I Avraham-Davidi, A Basu, T Burks, K Shekhar, M Hofree, ... Nature methods 14 (10), 955-958, 2017 | 998 | 2017 |
| Therapeutic efficacy of potent neutralizing HIV-1-specific monoclonal antibodies in SHIV-infected rhesus monkeys DH Barouch, JB Whitney, B Moldt, F Klein, TY Oliveira, J Liu, ... Nature 503 (7475), 224-228, 2013 | 808 | 2013 |
| Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis JA Farrell, Y Wang, SJ Riesenfeld, K Shekhar, A Regev, AF Schier Science 360 (6392), eaar3131, 2018 | 774 | 2018 |
| T helper cell cytokines modulate intestinal stem cell renewal and differentiation M Biton, AL Haber, N Rogel, G Burgin, S Beyaz, A Schnell, O Ashenberg, ... Cell 175 (5), 1307-1320. e22, 2018 | 512 | 2018 |
| Single-cell profiles of retinal ganglion cells differing in resilience to injury reveal neuroprotective genes NM Tran, K Shekhar, IE Whitney, A Jacobi, I Benhar, G Hong, W Yan, ... Neuron 104 (6), 1039-1055. e12, 2019 | 499 | 2019 |
| Molecular classification and comparative taxonomics of foveal and peripheral cells in primate retina YR Peng, K Shekhar, W Yan, D Herrmann, A Sappington, GS Bryman, ... Cell 176 (5), 1222-1237. e22, 2019 | 415 | 2019 |
| Magnitude and kinetics of CD8+ T cell activation during hyperacute HIV infection impact viral set point ZM Ndhlovu, P Kamya, N Mewalal, HN Kløverpris, T Nkosi, K Pretorius, ... Immunity 43 (3), 591-604, 2015 | 292 | 2015 |
| Automatic classification of cellular expression by nonlinear stochastic embedding (ACCENSE) K Shekhar, P Brodin, MM Davis, AK Chakraborty Proceedings of the National Academy of Sciences 111 (1), 202-207, 2014 | 244 | 2014 |
| Coordinate linkage of HIV evolution reveals regions of immunological vulnerability V Dahirel, K Shekhar, F Pereyra, T Miura, M Artyomov, S Talsania, ... Proceedings of the National Academy of Sciences 108 (28), 11530-11535, 2011 | 222 | 2011 |
| Cell atlas of the human fovea and peripheral retina W Yan, YR Peng, T van Zyl, A Regev, K Shekhar, D Juric, JR Sanes Scientific reports 10 (1), 9802, 2020 | 198 | 2020 |
| Solving neurodegeneration: common mechanisms and strategies for new treatments LK Wareham, SA Liddelow, S Temple, LI Benowitz, A Di Polo, ... Molecular neurodegeneration 17 (1), 23, 2022 | 182 | 2022 |
| Hydrophobic CDR3 residues promote the development of self-reactive T cells BD Stadinski, K Shekhar, I Gómez-Touriño, J Jung, K Sasaki, AK Sewell, ... Nature immunology 17 (8), 946-955, 2016 | 155 | 2016 |
| Cell atlas of aqueous humor outflow pathways in eyes of humans and four model species provides insight into glaucoma pathogenesis T van Zyl, W Yan, A McAdams, YR Peng, K Shekhar, A Regev, D Juric, ... Proceedings of the National Academy of Sciences 117 (19), 10339-10349, 2020 | 151 | 2020 |
| Comprehensive identification and spatial mapping of habenular neuronal types using single-cell RNA-seq S Pandey, K Shekhar, A Regev, AF Schier Current Biology 28 (7), 1052-1065. e7, 2018 | 144 | 2018 |
| Unified classification of mouse retinal ganglion cells using function, morphology, and gene expression J Goetz, ZF Jessen, A Jacobi, A Mani, S Cooler, D Greer, S Kadri, J Segal, ... Cell reports 40 (2), 2022 | 136 | 2022 |