Suivre
Beth Shapiro
Beth Shapiro
UC Santa Cruz Genomics Institute; Ecology and Evolutionary Biology, UC Santa Cruz
Adresse e-mail validée de ucsc.edu
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Bayesian coalescent inference of past population dynamics from molecular sequences
AJ Drummond, A Rambaut, B Shapiro, OG Pybus
Molecular biology and evolution 22 (5), 1185-1192, 2005
34632005
Whole-genome analyses resolve early branches in the tree of life of modern birds
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346 (6215), 1320-1331, 2014
19902014
Towards complete and error-free genome assemblies of all vertebrate species
A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ...
Nature 592 (7856), 737-746, 2021
19702021
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse
L Orlando, A Ginolhac, G Zhang, D Froese, A Albrechtsen, M Stiller, ...
Nature 499 (7456), 74-78, 2013
10182013
Diverse plant and animal genetic records from Holocene and Pleistocene sediments
E Willerslev, AJ Hansen, J Binladen, TB Brand, MTP Gilbert, B Shapiro, ...
Science 300 (5620), 791-795, 2003
8542003
Rise and fall of the Beringian steppe bison
B Shapiro, AJ Drummond, A Rambaut, MC Wilson, PE Matheus, AV Sher, ...
Science 306 (5701), 1561-1565, 2004
8032004
Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences
B Shapiro, A Rambaut, AJ Drummond
Molecular biology and evolution 23 (1), 7-9, 2006
7972006
Species-specific responses of Late Quaternary megafauna to climate and humans
ED Lorenzen, D Nogués-Bravo, L Orlando, J Weinstock, J Binladen, ...
Nature 479 (7373), 359-364, 2011
7942011
Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA
HN Poinar, C Schwarz, J Qi, B Shapiro, RDE MacPhee, B Buigues, ...
science 311 (5759), 392-394, 2006
7792006
Complete mitochondrial genomes of ancient canids suggest a European origin of domestic dogs
O Thalmann, B Shapiro, P Cui, VJ Schuenemann, SK Sawyer, ...
Science 342 (6160), 871-874, 2013
7312013
Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci
MS Gill, P Lemey, NR Faria, A Rambaut, B Shapiro, MA Suchard
Molecular biology and evolution 30 (3), 713-724, 2013
5422013
Skyline‐plot methods for estimating demographic history from nucleotide sequences
SYW Ho, B Shapiro
Molecular ecology resources 11 (3), 423-434, 2011
5322011
Dynamics of Pleistocene population extinctions in Beringian brown bears
I Barnes, P Matheus, B Shapiro, D Jensen, A Cooper
Science 295 (5563), 2267-2270, 2002
4362002
The earliest evidence for anatomically modern humans in northwestern Europe
T Higham, T Compton, C Stringer, R Jacobi, B Shapiro, E Trinkaus, ...
Nature 479 (7374), 521-524, 2011
3892011
Mitochondrial DNA analysis shows a Near Eastern Neolithic origin for domestic cattle and no indication of domestication of European aurochs
CJ Edwards, R Bollongino, A Scheu, A Chamberlain, A Tresset, JD Vigne, ...
Proceedings of the Royal Society B: Biological Sciences 274 (1616), 1377-1385, 2007
3632007
Dense sampling of bird diversity increases power of comparative genomics
S Feng, J Stiller, Y Deng, J Armstrong, QI Fang, AH Reeve, D Xie, G Chen, ...
Nature 587 (7833), 252-257, 2020
3512020
Prehistoric genomes reveal the genetic foundation and cost of horse domestication
M Schubert, H Jónsson, D Chang, C Der Sarkissian, L Ermini, A Ginolhac, ...
Proceedings of the National Academy of Sciences 111 (52), E5661-E5669, 2014
3512014
Conservation of biodiversity in the genomics era
MA Supple, B Shapiro
Genome biology 19, 1-12, 2018
3472018
Using time-structured data to estimate evolutionary rates of double-stranded DNA viruses
C Firth, A Kitchen, B Shapiro, MA Suchard, EC Holmes, A Rambaut
Molecular biology and evolution 27 (9), 2038-2051, 2010
3302010
The origins and spread of domestic horses from the Western Eurasian steppes
P Librado, N Khan, A Fages, MA Kusliy, T Suchan, L Tonasso-Calvière, ...
Nature 598 (7882), 634-640, 2021
3142021
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