Mark T. Holder

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Paul O. LewisProfessor of Ecology and Evolutionary Biology, University of ConnecticutAdresse e-mail validée de uconn.edu
Jeet SukumaranAssistant Professor, Dept. of Biology, San Diego State UniversityAdresse e-mail validée de sdsu.edu
David SwoffordVisiting Scientist, Florida Museum of Natural HistoryAdresse e-mail validée de duke.edu
John P. HuelsenbeckUniversity of California, BerkeleyAdresse e-mail validée de berkeley.edu
alan e gelfandProfessor of Statistical Science Duke UniversityAdresse e-mail validée de stat.duke.edu
Marc A. SuchardProfessor, University of California, Los AngelesAdresse e-mail validée de ucla.edu
tony rebeloScientist, South African National Biodiversity InstituteAdresse e-mail validée de sanbi.org.za
John SilanderProfessor of Ecology and Evolutionary Biology, University of ConnecticutAdresse e-mail validée de uconn.edu
David M. HillisProfessor of Integrative Biology, University of Texas at AustinAdresse e-mail validée de austin.utexas.edu
Aaron DarlingIllumina Australia; Professor @ University of Technology SydneyAdresse e-mail validée de illumina.com
Andrew RambautProfessor of Molecular Evolution, University of EdinburghAdresse e-mail validée de ed.ac.uk
Peter BeerliDepartment of Scientific Computing, Florida State UniversityAdresse e-mail validée de fsu.edu
Michael P. CummingsCenter for Bioinformatics and Computational Biology, University of MarylandAdresse e-mail validée de umd.edu
Daniel L. AyresUniversity of MarylandAdresse e-mail validée de umd.edu
Fredrik RonquistProfessor, Swedish Museum of Natural History, Dept. Bioinformatics and GeneticsAdresse e-mail validée de nrm.se
Andrew LatimerProfessor: Plant Sciences Department, Ecology Grad Group, Center for Population Biology, UC DavisAdresse e-mail validée de ucdavis.edu
Emily Jane McTavishUniversity of California, MercedAdresse e-mail validée de ucmerced.edu
Alisha HollowayPhylos BioscienceAdresse e-mail validée de phylosbioscience.com
Jeremy TaylorUniversity of MissouriAdresse e-mail validée de missouri.edu
Trina GuerraProgram Faculty, Texas State UniversityAdresse e-mail validée de txstate.edu

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Mark T. Holder

Associate Professor of Ecology and Evolutionary Biology, University of Kansas

Adresse e-mail validée de ku.edu - Page d'accueil

Evolutionary Biology


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
DendroPy: a Python library for phylogenetic computing J Sukumaran, MT Holder Bioinformatics 26 (12), 1569-1571, 2010	1741	2010
Phylogeny estimation: traditional and Bayesian approaches M Holder, PO Lewis Nature reviews genetics 4 (4), 275-284, 2003	943	2003
BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics DL Ayres, A Darling, DJ Zwickl, P Beerli, MT Holder, PO Lewis, ... Systematic biology 61 (1), 170-173, 2012	699	2012
SATe-II: very fast and accurate simultaneous estimation of multiple sequence alignments and phylogenetic trees K Liu, TJ Warnow, MT Holder, SM Nelesen, J Yu, AP Stamatakis, ... Systematic biology 61 (1), 90, 2012	409	2012
Polytomies and Bayesian phylogenetic inference PO Lewis, MT Holder, KE Holsinger Systematic biology 54 (2), 241-253, 2005	347	2005
Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness V Edgcomb, W Orsi, J Bunge, S Jeon, R Christen, C Leslin, M Holder, ... The ISME journal 5 (8), 1344-1356, 2011	255	2011
The interface of protein structure, protein biophysics, and molecular evolution DA Liberles, SA Teichmann, I Bahar, U Bastolla, J Bloom, ... Protein Science 21 (6), 769-785, 2012	238	2012
The posterior and the prior in Bayesian phylogenetics ME Alfaro, MT Holder Annu. Rev. Ecol. Evol. Syst. 37 (1), 19-42, 2006	233	2006
Difficulties in detecting hybridization MT Holder, JA Anderson, AK Holloway Systematic Biology 50 (6), 978-982, 2001	201	2001
Detection of multiple paternity in the Kemp's ridley sea turtle with limited sampling Kichler, Holder, Owens Molecular Ecology 8 (5), 819-830, 1999	155	1999
Explaining species distribution patterns through hierarchical modeling AE Gelfand, M Holder, A Latimer, PO Lewis, AG Rebelo, JA Silander Jr, ...	153	2006
Genetic algorithms and parallel processing in maximum-likelihood phylogeny inference MJ Brauer, MT Holder, LA Dries, DJ Zwickl, PO Lewis, DM Hillis Molecular Biology and Evolution 19 (10), 1717-1726, 2002	118	2002
NeXML: rich, extensible, and verifiable representation of comparative data and metadata RA Vos, JP Balhoff, JA Caravas, MT Holder, H Lapp, WP Maddison, ... Systematic biology 61 (4), 675-689, 2012	114	2012
A Dirichlet process prior for estimating lineage-specific substitution rates TA Heath, MT Holder, JP Huelsenbeck Molecular biology and evolution 29 (3), 939-955, 2012	112	2012
The big questions for biodiversity informatics AT Peterson, S Knapp, R Guralnick, J Soberón, MT Holder Systematics and biodiversity 8 (2), 159-168, 2010	111	2010
The phylogenetic position of Myxozoa: exploring conflicting signals in phylogenomic and ribosomal data sets NM Evans, MT Holder, MS Barbeitos, B Okamura, P Cartwright Molecular biology and evolution 27 (12), 2733-2746, 2010	100	2010
A justification for reporting the majority-rule consensus tree in Bayesian phylogenetics MT Holder, J Sukumaran, PO Lewis Systematic biology 57 (5), 814-821, 2008	100	2008
Two living species of coelacanths? MT Holder, MV Erdmann, TP Wilcox, RL Caldwell, DM Hillis Proceedings of the National Academy of Sciences 96 (22), 12616-12620, 1999	97	1999
Model parameterization, prior distributions, and the general time-reversible model in Bayesian phylogenetics DJ Zwickl, MT Holder Systematic Biology 53 (6), 877-888, 2004	92	2004
Incorporating the speciation process into species delimitation J Sukumaran, MT Holder, LL Knowles PLoS Computational Biology 17 (5), e1008924, 2021	83	2021

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