Joaquin Dopazo

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Coauteurs

David MontanerGenomics England - 100K Genomes ProjectAdresse e-mail validée de genomicsengland.co.uk
Ignacio MedinaUniversity of CambridgeAdresse e-mail validée de cam.ac.uk
Francisco García-GarcíaResearcher at the Prince Felipe Research Centre (CIPF)Adresse e-mail validée de cipf.es
Pablo MinguezResearcher & Head of Bioinformatics Unit - IIS Fundación Jiménez Díaz (Madrid, Spain)Adresse e-mail validée de quironsalud.es
Javier Santoyo-LopezEdinburgh GenomicsAdresse e-mail validée de ed.ac.uk
Jaime Huerta-CepasGroup Leader at CBGP (UPM-INIA-CSIC), Madrid, SpainAdresse e-mail validée de embl.de
Hernan DopazoProfessor of evolutionary and population genomicsAdresse e-mail validée de ege.fcen.uba.ar
Alicia AmadozIgenomix SLAdresse e-mail validée de igenomix.com
Marta BledaGenomics England, UKAdresse e-mail validée de genomicsengland.co.uk
Luz Garcia-AlonsoPrincipal Bioinformatician at Wellcome Sanger InstituteAdresse e-mail validée de sanger.ac.uk
Alfonso ValenciaICREA Professor. Barcelona Supercomputing Center.Adresse e-mail validée de bsc.es
Toni GabaldonGroup Leader, Institute for Research in Biomedicine (IRB), Barcelona Supercomputing Centre (BSC)Adresse e-mail validée de crg.es
Leonardo ArbizaCornell UniversityAdresse e-mail validée de cornell.edu
Enrique VidalPost Doctoral Researcher, Centre de Regulacio Genomica, UPF, BarcelonaAdresse e-mail validée de crg.eu
Maria J. MartinEuropean Bioinformatics InstituteAdresse e-mail validée de ebi.ac.uk
Joan Anton Puig Butille, PhdHead of Molecular Biology CORE laboratory, Hospital Clinic BarcelonaAdresse e-mail validée de clinic.cat
Francisco AzuajeGenomics EnglandAdresse e-mail validée de genomicsengland.co.uk
Enrique S. Quintana-OrtíUniversitat Politècnica de València, SpainAdresse e-mail validée de disca.upv.es
Holger HeynCNAGAdresse e-mail validée de cnag.eu
Marc A. Marti-RenomICREA Research Professor @ CNAG & CRGAdresse e-mail validée de cnag.eu

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Joaquin Dopazo

Computational Medicine Platform, FPS, Hospital Virgen del Rocio, Sevilla, Spain

Adresse e-mail validée de juntadeandalucia.es - Page d'accueil

Genomics Systems medicine Precision Medicine Clinical bioinformatics Machine Learning


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
High-throughput functional annotation and data mining with the Blast2GO suite S Götz, JM García-Gómez, J Terol, TD Williams, SH Nagaraj, MJ Nueda, ... Nucleic acids research 36 (10), 3420-3435, 2008	4317	2008
Differential expression in RNA-seq: a matter of depth S Tarazona, F García-Alcalde, J Dopazo, A Ferrer, A Conesa Genome research 21 (12), 2213-2223, 2011	1692	2011
FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes F Al-Shahrour, R Díaz-Uriarte, J Dopazo Bioinformatics 20 (4), 578-580, 2004	1393	2004
Qualimap: evaluating next-generation sequencing alignment data F García-Alcalde, K Okonechnikov, J Carbonell, LM Cruz, S Götz, ... Bioinformatics 28 (20), 2678-2679, 2012	1048	2012
The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models L Shi, G Campbell, WD Jones, F Campagne, Z Wen, SJ Walker, Z Su, ... Nature biotechnology 28 (8), 827-838, 2010	883	2010
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium Nature biotechnology 32 (9), 903-914, 2014	873	2014
A hierarchical unsupervised growing neural network for clustering gene expression patterns J Herrero, A Valencia, J Dopazo Bioinformatics 17 (2), 126, 2001	817	2001
Genomics of the origin and evolution of Citrus GA Wu, J Terol, V Ibanez, A López-García, E Pérez-Román, C Borredá, ... Nature 554 (7692), 311-316, 2018	763	2018
Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus BM Javierre, AF Fernandez, J Richter, F Al-Shahrour, JI Martin-Subero, ... Genome research 20 (2), 170-179, 2010	744	2010
Initial genomics of the human nucleolus A Németh, A Conesa, J Santoyo-Lopez, I Medina, D Montaner, B Péterfia, ... PLoS genetics 6 (3), e1000889, 2010	451	2010
ETE: a python Environment for Tree Exploration J Huerta-Cepas, J Dopazo, T Gabaldón BMC bioinformatics 11, 1-7, 2010	450	2010
Differential lipid partitioning between adipocytes and tissue macrophages modulates macrophage lipotoxicity and M2/M1 polarization in obese mice X Prieur, CYL Mok, VR Velagapudi, V Núñez, L Fuentes, D Montaner, ... Diabetes 60 (3), 797-809, 2011	427	2011
Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling I Medina, J Carbonell, L Pulido, SC Madeira, S Goetz, A Conesa, ... Nucleic acids research 38 (suppl_2), W210-W213, 2010	367	2010
Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection AD Ewing, KE Houlahan, Y Hu, K Ellrott, C Caloian, TN Yamaguchi, ... Nature methods 12 (7), 623-630, 2015	336	2015
A Phylogenetic Analysis of 34 Chloroplast Genomes Elucidates the Relationships between Wild and Domestic Species within the Genus Citrus J Carbonell-Caballero, R Alonso, V Ibañez, J Terol, M Talon, J Dopazo Molecular biology and evolution 32 (8), 2015-2035, 2015	332	2015
BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments F Al-Shahrour, P Minguez, J Tárraga, D Montaner, E Alloza, ... Nucleic acids research 34 (suppl_2), W472-W476, 2006	325	2006
FatiGO+: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments F Al-Shahrour, P Minguez, J Tárraga, I Medina, E Alloza, D Montaner, ... Nucleic acids research 35 (suppl_2), W91-W96, 2007	323	2007
BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments F Al-Shahrour, P Minguez, JM Vaquerizas, L Conde, J Dopazo Nucleic acids research 33 (suppl_2), W460-W464, 2005	305	2005
SNPeffect 4.0: on-line prediction of molecular and structural effects of protein-coding variants G De Baets, J Van Durme, J Reumers, S Maurer-Stroh, P Vanhee, ... Nucleic acids research 40 (D1), D935-D939, 2012	297	2012
The effects of death and post-mortem cold ischemia on human tissue transcriptomes PG Ferreira, M Muñoz-Aguirre, F Reverter, CP Sa Godinho, A Sousa, ... Nature communications 9 (1), 490, 2018	290	2018

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