Seuraa
Adrien Melquiond
Adrien Melquiond
University Medical Center Utrecht, NL
Vahvistettu sähköpostiosoite verkkotunnuksessa umcutrecht.nl - Kotisivu
Nimike
Viittaukset
Viittaukset
Vuosi
The HADDOCK2. 2 web server: user-friendly integrative modeling of biomolecular complexes
GCP Van Zundert, J Rodrigues, M Trellet, C Schmitz, PL Kastritis, ...
Journal of molecular biology 428 (4), 720-725, 2016
27412016
A unified conformational selection and induced fit approach to protein-peptide docking
M Trellet, ASJ Melquiond, AMJJ Bonvin
PloS one 8 (3), e58769, 2013
2002013
Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment
MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ...
Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016
1692016
Building macromolecular assemblies by information-driven docking
E Karaca, ASJ Melquiond, SJ De Vries, PL Kastritis, AMJJ Bonvin
Molecular & Cellular Proteomics 9 (8), 1784-1794, 2010
1602010
Performance of HADDOCK and a simple contact-based protein–ligand binding affinity predictor in the D3R Grand Challenge 2
Z Kurkcuoglu, PI Koukos, N Citro, ME Trellet, J Rodrigues, IS Moreira, ...
Journal of computer-aided molecular design 32, 175-185, 2018
1322018
Blind prediction of homo‐and hetero‐protein complexes: The CASP13‐CAPRI experiment
MF Lensink, G Brysbaert, N Nadzirin, S Velankar, RAG Chaleil, T Gerguri, ...
Proteins: Structure, Function, and Bioinformatics 87 (12), 1200-1221, 2019
1282019
Clustering biomolecular complexes by residue contacts similarity
JP Rodrigues, M Trellet, C Schmitz, P Kastritis, E Karaca, ASJ Melquiond, ...
Proteins: Structure, Function, and Bioinformatics 80 (7), 1810-1817, 2012
1272012
Role of the region 23-28 in Aβ fibril formation: insights from simulations of the monomers and dimers of Alzheimer's peptides Aβ40 and Aβ42
A Melquiond, X Dong, N Mousseau, P Derreumaux
Current Alzheimer Research 5 (3), 244-250, 2008
1112008
Insight into cyanobacterial circadian timing from structural details of the KaiB–KaiC interaction
J Snijder, RJ Burnley, A Wiegard, ASJ Melquiond, AMJJ Bonvin, ...
Proceedings of the National Academy of Sciences 111 (4), 1379-1384, 2014
932014
Integrative modeling of biomolecular complexes: HADDOCKing with cryo-electron microscopy data
GCP van Zundert, ASJ Melquiond, AMJJ Bonvin
Structure 23 (5), 949-960, 2015
792015
dMM-PBSA: a new HADDOCK scoring function for protein-peptide docking
D Spiliotopoulos, PL Kastritis, ASJ Melquiond, AMJJ Bonvin, G Musco, ...
Frontiers in molecular biosciences 3, 46, 2016
782016
Defining the limits of homology modeling in information‐driven protein docking
J Rodrigues, ASJ Melquiond, E Karaca, M Trellet, M Van Dijk, ...
Proteins: Structure, Function, and Bioinformatics 81 (12), 2119-2128, 2013
782013
The HADDOCK2. 4 web server for integrative modeling of biomolecular complexes
RV Honorato, ME Trellet, B Jiménez-García, JJ Schaarschmidt, M Giulini, ...
Nature protocols 19 (11), 3219-3241, 2024
712024
Following the aggregation of amyloid-forming peptides by computer simulations
A Melquiond, G Boucher, N Mousseau, P Derreumaux
The Journal of chemical physics 122 (17), 2005
692005
Structures of soluble amyloid oligomers from computer simulations
A Melquiond, N Mousseau, P Derreumaux
PROTEINS: Structure, Function, and Bioinformatics 65 (1), 180-191, 2006
662006
Sense and simplicity in HADDOCK scoring: Lessons from CASP‐CAPRI round 1
A Vangone, J Rodrigues, LC Xue, GCP Van Zundert, C Geng, ...
Proteins: Structure, Function, and Bioinformatics 85 (3), 417-423, 2017
632017
Blind prediction of interfacial water positions in CAPRI
MF Lensink, IH Moal, PA Bates, PL Kastritis, ASJ Melquiond, E Karaca, ...
Proteins: Structure, Function, and Bioinformatics 82 (4), 620-632, 2014
632014
Strengths and weaknesses of data‐driven docking in critical assessment of prediction of interactions
SJ de Vries, ASJ Melquiond, PL Kastritis, E Karaca, A Bordogna, ...
Proteins: Structure, Function, and Bioinformatics 78 (15), 3242-3249, 2010
552010
Enhancers reside in a unique epigenetic environment during early zebrafish development
LJT Kaaij, M Mokry, M Zhou, M Musheev, G Geeven, ASJ Melquiond, ...
Genome biology 17, 1-15, 2016
452016
Probing amyloid fibril formation of the NFGAIL peptide by computer simulations
A Melquiond, JC Gelly, N Mousseau, P Derreumaux
The Journal of chemical physics 126 (6), 2007
442007
Järjestelmä ei voi suorittaa toimenpidettä nyt. Yritä myöhemmin uudelleen.
Artikkelit 1–20