Seuraa
Mikael Trellet
Mikael Trellet
Fluigent
Vahvistettu sähköpostiosoite verkkotunnuksessa fluigent.com
Nimike
Viittaukset
Viittaukset
Vuosi
The HADDOCK2. 2 web server: user-friendly integrative modeling of biomolecular complexes
GCP Van Zundert, J Rodrigues, M Trellet, C Schmitz, PL Kastritis, ...
Journal of molecular biology 428 (4), 720-725, 2016
27442016
Posttranslational modification of pili upon cell contact triggers N. meningitidis dissemination
J Chamot-Rooke, G Mikaty, C Malosse, M Soyer, A Dumont, J Gault, ...
Science 331 (6018), 778, 2011
2202011
Large-scale prediction of binding affinity in protein–small ligand complexes: the PRODIGY-LIG web server
A Vangone, J Schaarschmidt, P Koukos, C Geng, N Citro, ME Trellet, ...
Bioinformatics 35 (9), 1585-1587, 2019
2022019
A unified conformational selection and induced fit approach to protein-peptide docking
M Trellet, ASJ Melquiond, AMJJ Bonvin
PloS one 8 (3), e58769, 2013
2002013
Performance of HADDOCK and a simple contact-based protein–ligand binding affinity predictor in the D3R Grand Challenge 2
Z Kurkcuoglu, PI Koukos, N Citro, ME Trellet, J Rodrigues, IS Moreira, ...
Journal of computer-aided molecular design 32, 175-185, 2018
1322018
Blind prediction of homo‐and hetero‐protein complexes: The CASP13‐CAPRI experiment
MF Lensink, G Brysbaert, N Nadzirin, S Velankar, RAG Chaleil, T Gerguri, ...
Proteins: Structure, Function, and Bioinformatics 87 (12), 1200-1221, 2019
1282019
Clustering biomolecular complexes by residue contacts similarity
JP Rodrigues, M Trellet, C Schmitz, P Kastritis, E Karaca, ASJ Melquiond, ...
Proteins: Structure, Function, and Bioinformatics 80 (7), 1810-1817, 2012
1272012
Community‐wide evaluation of methods for predicting the effect of mutations on protein–protein interactions
R Moretti, SJ Fleishman, R Agius, M Torchala, PA Bates, PL Kastritis, ...
Proteins: Structure, Function, and Bioinformatics 81 (11), 1980-1987, 2013
1142013
pdb-tools: A swiss army knife for molecular structures
JP Rodrigues, JMC Teixeira, M Trellet, AMJJ Bonvin
F1000Research 7, 1961, 2018
1032018
SpotOn: high accuracy identification of protein-protein interface hot-spots
IS Moreira, PI Koukos, R Melo, JG Almeida, AJ Preto, J Schaarschmidt, ...
Scientific reports 7 (1), 8007, 2017
992017
Defining the limits of homology modeling in information‐driven protein docking
J Rodrigues, ASJ Melquiond, E Karaca, M Trellet, M Van Dijk, ...
Proteins: Structure, Function, and Bioinformatics 81 (12), 2119-2128, 2013
782013
The HADDOCK2. 4 web server for integrative modeling of biomolecular complexes
RV Honorato, ME Trellet, B Jiménez-García, JJ Schaarschmidt, M Giulini, ...
Nature protocols 19 (11), 3219-3241, 2024
732024
Sense and simplicity in HADDOCK scoring: Lessons from CASP‐CAPRI round 1
A Vangone, J Rodrigues, LC Xue, GCP Van Zundert, C Geng, ...
Proteins: Structure, Function, and Bioinformatics 85 (3), 417-423, 2017
642017
The DisVis and PowerFit web servers: explorative and integrative modeling of biomolecular complexes
GCP Van Zundert, M Trellet, J Schaarschmidt, Z Kurkcuoglu, M David, ...
Journal of molecular biology 429 (3), 399-407, 2017
612017
Inhibition of the integrated stress response by viral proteins that block p-eIF2–eIF2B association
HH Rabouw, LJ Visser, TC Passchier, MA Langereis, F Liu, P Giansanti, ...
Nature Microbiology 5 (11), 1361-1373, 2020
452020
Sharing data from molecular simulations
M Abraham, R Apostolov, J Barnoud, P Bauer, C Blau, AMJJ Bonvin, ...
Journal of Chemical Information and Modeling 59 (10), 4093-4099, 2019
392019
Semantics for an integrative and immersive pipeline combining visualization and analysis of molecular data
M Trellet, N Férey, J Flotyński, M Baaden, P Bourdot
Journal of integrative bioinformatics 15 (2), 20180004, 2018
302018
PDB‐tools Web: A User‐friendly Interface for the Manipulation of PDB Files
B Jiménez‐García, JMC Teixeira, M Trellet, JP Rodrigues, AMJJ Bonvin
Proteins: Structure, Function, and Bioinformatics 89 (3), 330-335, 2021
262021
Folding then binding vs folding through binding in macrocyclic peptide inhibitors of human pancreatic α-amylase
L Goldbach, BJA Vermeulen, S Caner, M Liu, C Tysoe, L van Gijzel, ...
ACS chemical biology 14 (8), 1751-1759, 2019
262019
Computational peptidology
P Zhou, J Huang
Humana Press, 2015
242015
Järjestelmä ei voi suorittaa toimenpidettä nyt. Yritä myöhemmin uudelleen.
Artikkelit 1–20