| Proksee: in-depth characterization and visualization of bacterial genomes JR Grant, E Enns, E Marinier, A Mandal, EK Herman, C Chen, M Graham, ... Nucleic acids research 51 (W1), W484-W492, 2023 | 662 | 2023 |
| Pan genome of the phytoplankton Emiliania underpins its global distribution BA Read, J Kegel, MJ Klute, A Kuo, SC Lefebvre, F Maumus, C Mayer, ... Nature 499 (7457), 209-213, 2013 | 552 | 2013 |
| A eukaryote without a mitochondrial organelle A Karnkowska, V Vacek, Z Zubáčová, SC Treitli, R Petrželková, L Eme, ... Current Biology 26 (10), 1274-1284, 2016 | 465 | 2016 |
| Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs BA Curtis, G Tanifuji, F Burki, A Gruber, M Irimia, S Maruyama, MC Arias, ... Nature 492 (7427), 59, 2012 | 435 | 2012 |
| EukProt: a database of genome-scale predicted proteins across the diversity of eukaryotes DJ Richter, C Berney, JFH Strassert, YP Poh, EK Herman, ... Peer Community Journal 2, 2022 | 140 | 2022 |
| Evolutionary reconstruction of the retromer complex and its function in Trypanosoma brucei VL Koumandou, MJ Klute, EK Herman, R Nunez-Miguel, JB Dacks, ... Journal of cell science 124 (9), 1496-1509, 2011 | 139 | 2011 |
| Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis E Gentekaki, BA Curtis, CW Stairs, V Klimeš, M Eliáš, DE Salas-Leiva, ... PLoS biology 15 (9), e2003769, 2017 | 131 | 2017 |
| Missing pieces of an ancient puzzle: Evolution of the eukaryotic membrane-trafficking system A Schlacht, EK Herman, MJ Klute, MC Field, JB Dacks Cold Spring Harbor perspectives in biology 6 (10), a016048, 2014 | 73 | 2014 |
| The Mitochondrial Genome and a 60‐kb Nuclear DNA Segment from Naegleria fowleri, the Causative Agent of Primary Amoebic Meningoencephalitis EK Herman, AL Greninger, GS Visvesvara, F Marciano‐Cabral, JB Dacks, ... Journal of Eukaryotic Microbiology 60 (2), 179-191, 2013 | 56 | 2013 |
| The oxymonad genome displays canonical eukaryotic complexity in the absence of a mitochondrion A Karnkowska, SC Treitli, O Brzoň, L Novák, V Vacek, P Soukal, ... Molecular biology and evolution 36 (10), 2292-2312, 2019 | 52 | 2019 |
| Multivesicular bodies in the enigmatic amoeboflagellate Breviata anathema and the evolution of ESCRT 0 EK Herman, G Walker, M van der Giezen, JB Dacks Journal of cell science 124 (4), 613-621, 2011 | 44 | 2011 |
| Genomics and transcriptomics yields a system-level view of the biology of the pathogen Naegleria fowleri EK Herman, A Greninger, M van der Giezen, ML Ginger, ... BMC biology 19, 1-18, 2021 | 34 | 2021 |
| Resolving the homology—function relationship through comparative genomics of membrane-trafficking machinery and parasite cell biology CM Klinger, I Ramirez-Macias, EK Herman, AP Turkewitz, MC Field, ... Molecular and biochemical parasitology 209 (1-2), 88-103, 2016 | 27 | 2016 |
| Mechanism and evolution of the Zn-fingernail required for interaction of VARP with VPS29 H Crawley-Snowdon, JC Yang, NR Zaccai, LJ Davis, L Wartosch, ... Nature Communications 11 (1), 5031, 2020 | 22 | 2020 |
| Membrane Trafficking Modulation during Entamoeba Encystation E Herman, MA Siegesmund, MJ Bottery, R van Aerle, MM Shather, ... Scientific reports 7 (1), 12854, 2017 | 21 | 2017 |
| Evaluating the potential of third generation metagenomic sequencing for the detection of BRD pathogens and genetic determinants of antimicrobial resistance in chronically ill … CN Freeman, EK Herman, J Abi Younes, DE Ramsay, N Erikson, ... BMC veterinary research 18 (1), 211, 2022 | 20 | 2022 |
| An ER‐directed transcriptional response to unfolded protein stress in the absence of conserved sensor‐transducer proteins in Giardia lamblia C Spycher, EK Herman, L Morf, W Qi, H Rehrauer, C Aquino Fournier, ... Molecular microbiology 88 (4), 754-771, 2013 | 19 | 2013 |
| Losses, Expansions, and Novel Subunit Discovery of Adaptor Protein Complexes in Haptophyte Algae LJY Lee, MJ Klute, EK Herman, B Read, JB Dacks Protist 166 (5), 585-597, 2015 | 15 | 2015 |
| Regulation of early endosomes across eukaryotes: Evolution and functional homology of Vps9 proteins EK Herman, M Ali, MC Field, JB Dacks Traffic 19 (7), 546-563, 2018 | 14 | 2018 |
| Identification and characterisation of a cryptic Golgi complex in Naegleria gruberi EK Herman, L Yiangou, DM Cantoni, CN Miller, F Marciano-Cabral, ... Journal of cell science 131 (7), jcs213306, 2018 | 12 | 2018 |