دنبال کردن
Joaquin Dopazo
Joaquin Dopazo
Computational Medicine Platform, FPS, Hospital Virgen del Rocio, Sevilla, Spain
ایمیل تأیید شده در juntadeandalucia.es - صفحهٔ اصلی
عنوان
نقل شده توسط
نقل شده توسط
سال
High-throughput functional annotation and data mining with the Blast2GO suite‏
S Götz, JM García-Gómez, J Terol, TD Williams, SH Nagaraj, MJ Nueda, ...‏
Nucleic acids research 36 (10), 3420-3435, 2008‏
44152008
Differential expression in RNA-seq: a matter of depth‏
S Tarazona, F García-Alcalde, J Dopazo, A Ferrer, A Conesa‏
Genome research 21 (12), 2213-2223, 2011‏
17112011
FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes‏
F Al-Shahrour, R Díaz-Uriarte, J Dopazo‏
Bioinformatics 20 (4), 578-580, 2004‏
14022004
Qualimap: evaluating next-generation sequencing alignment data‏
F García-Alcalde, K Okonechnikov, J Carbonell, LM Cruz, S Götz, ...‏
Bioinformatics 28 (20), 2678-2679, 2012‏
10862012
The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models‏
L Shi, G Campbell, WD Jones, F Campagne, Z Wen, SJ Walker, Z Su, ...‏
Nature biotechnology 28 (8), 827-838, 2010‏
9042010
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium‏
Nature biotechnology 32 (9), 903-914, 2014‏
8952014
A hierarchical unsupervised growing neural network for clustering gene expression patterns‏
J Herrero, A Valencia, J Dopazo‏
Bioinformatics 17 (2), 126, 2001‏
8162001
Genomics of the origin and evolution of Citrus‏
GA Wu, J Terol, V Ibanez, A López-García, E Pérez-Román, C Borredá, ...‏
Nature 554 (7692), 311-316, 2018‏
8092018
Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus‏
BM Javierre, AF Fernandez, J Richter, F Al-Shahrour, JI Martin-Subero, ...‏
Genome research 20 (2), 170-179, 2010‏
7502010
ETE: a python Environment for Tree Exploration‏
J Huerta-Cepas, J Dopazo, T Gabaldón‏
BMC bioinformatics 11, 1-7, 2010‏
4592010
Initial genomics of the human nucleolus‏
A Németh, A Conesa, J Santoyo-Lopez, I Medina, D Montaner, B Péterfia, ...‏
PLoS genetics 6 (3), e1000889, 2010‏
4542010
Differential lipid partitioning between adipocytes and tissue macrophages modulates macrophage lipotoxicity and M2/M1 polarization in obese mice‏
X Prieur, CYL Mok, VR Velagapudi, V Núñez, L Fuentes, D Montaner, ...‏
Diabetes 60 (3), 797-809, 2011‏
4332011
Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling‏
I Medina, J Carbonell, L Pulido, SC Madeira, S Goetz, A Conesa, ...‏
Nucleic acids research 38 (suppl_2), W210-W213, 2010‏
3682010
Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection‏
AD Ewing, KE Houlahan, Y Hu, K Ellrott, C Caloian, TN Yamaguchi, ...‏
Nature methods 12 (7), 623-630, 2015‏
3452015
A Phylogenetic Analysis of 34 Chloroplast Genomes Elucidates the Relationships between Wild and Domestic Species within the Genus Citrus‏
J Carbonell-Caballero, R Alonso, V Ibañez, J Terol, M Talon, J Dopazo‏
Molecular biology and evolution 32 (8), 2015-2035, 2015‏
3392015
BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments‏
F Al-Shahrour, P Minguez, J Tárraga, D Montaner, E Alloza, ...‏
Nucleic acids research 34 (suppl_2), W472-W476, 2006‏
3272006
FatiGO+: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments‏
F Al-Shahrour, P Minguez, J Tárraga, I Medina, E Alloza, D Montaner, ...‏
Nucleic acids research 35 (suppl_2), W91-W96, 2007‏
3222007
BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments‏
F Al-Shahrour, P Minguez, JM Vaquerizas, L Conde, J Dopazo‏
Nucleic acids research 33 (suppl_2), W460-W464, 2005‏
3062005
The effects of death and post-mortem cold ischemia on human tissue transcriptomes‏
PG Ferreira, M Muñoz-Aguirre, F Reverter, CP Sa Godinho, A Sousa, ...‏
Nature communications 9 (1), 490, 2018‏
3002018
SNPeffect 4.0: on-line prediction of molecular and structural effects of protein-coding variants‏
G De Baets, J Van Durme, J Reumers, S Maurer-Stroh, P Vanhee, ...‏
Nucleic acids research 40 (D1), D935-D939, 2012‏
3002012
سیستم در حال حاضر قادر به انجام عملکرد نیست. بعداً دوباره امتحان کنید.
مقاله‌ها 1–20