| Clonal evolution of glioblastoma under therapy J Wang, E Cazzato, E Ladewig, V Frattini, DIS Rosenbloom, S Zairis, ... Nature genetics 48 (7), 768-776, 2016 | 745 | 2016 |
| Inferring causal molecular networks: empirical assessment through a community-based effort SM Hill, LM Heiser, T Cokelaer, M Unger, NK Nesser, DE Carlin, Y Zhang, ... Nature Methods, 2016 | 258 | 2016 |
| Neuralized1 activates CPEB3: a function for nonproteolytic ubiquitin in synaptic plasticity and memory storage E Pavlopoulos, P Trifilieff, V Chevaleyre, L Fioriti, S Zairis, A Pagano, ... Cell 147 (6), 1369-1383, 2011 | 213 | 2011 |
| The genetics of nodal marginal zone lymphoma V Spina, H Khiabanian, M Messina, S Monti, L Cascione, A Bruscaggin, ... Blood, The Journal of the American Society of Hematology 128 (10), 1362-1373, 2016 | 176 | 2016 |
| Distinct viral and mutational spectrum of endemic Burkitt lymphoma F Abate, MR Ambrosio, L Mundo, MA Laginestra, F Fuligni, M Rossi, ... PLoS pathogens 11 (10), e1005158, 2015 | 175 | 2015 |
| Activating mutations and translocations in the guanine exchange factor VAV1 in peripheral T-cell lymphomas F Abate, AC da Silva-Almeida, S Zairis, J Robles-Valero, L Couronne, ... Proceedings of the National Academy of Sciences, 201608839, 2017 | 129 | 2017 |
| p53 maintains baseline expression of multiple tumor suppressor genes K Pappas, J Xu, S Zairis, L Resnick-Silverman, F Abate, N Steinbach, ... Molecular Cancer Research, molcanres. 0089.2017, 2017 | 80 | 2017 |
| Pegasus: a comprehensive annotation and prediction tool for detection of driver gene fusions in cancer F Abate, S Zairis, E Ficarra, A Acquaviva, CH Wiggins, V Frattini, ... BMC Systems Biology 8, 97, 2014 | 75 | 2014 |
| Interrogation of Eukaryotic Stop Codon Readthrough Signals by in Vitro RNA Selection AV Anzalone, S Zairis, AJ Lin, R Rabadan, VW Cornish Biochemistry 58 (8), 1167-1178, 2019 | 37 | 2019 |
| Reprogramming eukaryotic translation with ligand-responsive synthetic RNA switches AV Anzalone, AJ Lin, S Zairis, R Rabadan, VW Cornish Nature methods 13 (5), 453-458, 2016 | 36 | 2016 |
| Stylistic clusters and the Syrian/South Syrian tradition of first-millennium BCE Levantine ivory carving: a machine learning approach AR Gansell, JW van de Meent, S Zairis, CH Wiggins Journal of Archaeological Science 44, 194-205, 2014 | 30 | 2014 |
| Moduli Spaces of Phylogenetic Trees Describing Tumor Evolutionary Patterns S Zairis, H Khiabanian, AJ Blumberg, R Rabadan Lecture Notes in Computer Science 8609, 528-539, 2014 | 27 | 2014 |
| Genomic data analysis in tree spaces S Zairis, H Khiabanian, AJ Blumberg, R Rabadan arXiv preprint arXiv:1607.07503, 2016 | 24 | 2016 |
| Oncogenic Vav1-Myo1f induces therapeutically targetable macrophage-rich tumor microenvironment in peripheral T cell lymphoma JR Cortes, I Filip, R Albero, JA Patiño-Galindo, SA Quinn, WHW Lin, ... Cell reports 39 (3), 2022 | 20 | 2022 |
| The coding genome of nodal marginal zone lymphoma reveals recurrent molecular alterations of PTPRD and other Jak/Stat signaling genes V Spina, H Khiabanian, A Bruscaggin, M Messina, S Monti, AB Holmes, ... Blood 124 (21), 705, 2014 | 16 | 2014 |
| Prospective analysis of radiation oncology image and plan‐driven peer review for head and neck cancer S Zairis, DN Margalit, TJ Royce, WD Powlis, RB Tishler, JD Schoenfeld Head & Neck, 2017 | 11 | 2017 |
| Prospects of gravitational wave data mining and exploration via evolutionary computing M Lightman, J Thurakal, J Dwyer, R Grossman, P Kalmus, L Matone, ... Journal of Physics: Conference Series 32 (1), 58, 2006 | 10 | 2006 |
| Loss of PBRM1 alters promoter histone modifications and activates ALDH1A1 to drive renal cell carcinoma DA Schoenfeld, R Zhou, S Zairis, W Su, N Steinbach, D Mathur, A Bansal, ... Molecular Cancer Research, 2022 | 8 | 2022 |
| RNA sequencing of Hodgkin lymphoma Reed-Sternberg cells uncovers a plasma cell signature and escape from NK cell recognition E Cesarman, M Roshal, J Reichel, W Florian, B Binder, S Zairis, J Sadek, ... Blood 134, 549, 2019 | 2 | 2019 |
| Quantitative Approaches to the Genomics of Clonal Evolution S Zairis Columbia University, 2018 | 2 | 2018 |