SIMD|| DNA: Single instruction, multiple data computation with DNA strand displacement cascades B Wang, C Chalk, D Soloveichik DNA Computing and Molecular Programming: 25th International Conference, DNA …, 2019 | 25 | 2019 |
Optimal staged self-assembly of general shapes C Chalk, E Martinez, R Schweller, L Vega, A Winslow, T Wylie Algorithmica 80, 1383-1409, 2018 | 24 | 2018 |
Deep molecular programming: a natural implementation of binary-weight ReLU neural networks M Vasic, C Chalk, S Khurshid, D Soloveichik International Conference on Machine Learning, 9701-9711, 2020 | 21 | 2020 |
Composable rate-independent computation in continuous chemical reaction networks C Chalk, N Kornerup, W Reeves, D Soloveichik IEEE/ACM Transactions on Computational Biology and Bioinformatics 18 (1 …, 2019 | 21 | 2019 |
Freezing simulates non-freezing tile automata C Chalk, A Luchsinger, E Martinez, R Schweller, A Winslow, T Wylie DNA Computing and Molecular Programming: 24th International Conference, DNA …, 2018 | 21 | 2018 |
Programming and training rate-independent chemical reaction networks M Vasić, C Chalk, A Luchsinger, S Khurshid, D Soloveichik Proceedings of the National Academy of Sciences 119 (24), e2111552119, 2022 | 17 | 2022 |
Universal Shape Replicators via Self-Assembly with Attractive and Repulsive Forces*, & C Chalk, ED Demaine, ML Demaine, E Martinez, R Schweller, L Vega, ... Proceedings of the Twenty-Eighth Annual ACM-SIAM Symposium on Discrete …, 2017 | 13 | 2017 |
Strict self-assembly of fractals using multiple hands CT Chalk, DA Fernandez, A Huerta, MA Maldonado, RT Schweller, ... Algorithmica 76, 195-224, 2016 | 13 | 2016 |
Programming substrate-independent kinetic barriers with thermodynamic binding networks K Breik, C Chalk, D Doty, D Haley, D Soloveichik IEEE/ACM transactions on computational biology and bioinformatics 18 (1 …, 2019 | 11 | 2019 |
Parallel molecular computation on digital data stored in DNA B Wang, SS Wang, C Chalk, AD Ellington, D Soloveichik Proceedings of the National Academy of Sciences 120 (37), e2217330120, 2023 | 9 | 2023 |
Thermodynamically favorable computation via tile self-assembly C Chalk, J Hendricks, MJ Patitz, M Sharp Unconventional Computation and Natural Computation: 17th International …, 2018 | 8 | 2018 |
Self-assembly of any shape with constant tile types using high temperature C Chalk, A Luchsinger, R Schweller, T Wylie Leibniz international proceedings in informatics 112, 2018 | 7 | 2018 |
Optimal staged self-assembly of linear assemblies C Chalk, E Martinez, R Schweller, L Vega, A Winslow, T Wylie Natural Computing 18, 527-548, 2019 | 4 | 2019 |
Concentration independent random number generation in tile self-assembly CT Chalk, B Fu, E Martinez, R Schweller, T Wylie Theoretical Computer Science 667, 1-15, 2017 | 1 | 2017 |
Flipping tiles: concentration independent coin flips in tile self-assembly CT Chalk, B Fu, A Huerta, MA Maldonado, E Martinez, RT Schweller, ... DNA Computing and Molecular Programming: 21st International Conference, DNA …, 2015 | 1 | 2015 |
Molecular computation at equilibrium via programmable entropy B Wang, C Chalk, D Doty, D Soloveichik bioRxiv, 2024.09. 13.612990, 2024 | | 2024 |
Learning and Inference in a Lattice Model of Multicomponent Condensates C Chalk, S Buse, K Shrinivas, A Murugan, E Winfree 30th International Conference on DNA Computing and Molecular Programming …, 2024 | | 2024 |
Fractals, Randomization, Optimal Constructions, and Replication in Algorithmic Self-Assembly C Chalk | | 2017 |
24th Annual European Symposium on Algorithms (ESA 2016) L Georgiadis, GF Italiano, N Parotsidis, O Svensson, M Abolhassani, ... Schloss Dagstuhl-Leibniz-Zentrum für Informatik GmbH, 2016 | | 2016 |