| Predicting anti-inflammatory peptides by ensemble machine learning and deep learning J Guan, L Yao, CR Chung, P Xie, Y Zhang, J Deng, YC Chiang, TY Lee Journal of Chemical Information and Modeling 63 (24), 7886-7898, 2023 | 12 | 2023 |
| AMPActiPred: A three‐stage framework for predicting antibacterial peptides and activity levels with deep forest L Yao, J Guan, P Xie, CR Chung, J Deng, Y Huang, YC Chiang, TY Lee Protein Science 33 (6), e5006, 2024 | 11 | 2024 |
| A two-stage computational framework for identifying antiviral peptides and their functional types based on contrastive learning and multi-feature fusion strategy J Guan, L Yao, P Xie, CR Chung, Y Huang, YC Chiang, TY Lee Briefings in Bioinformatics 25 (3), bbae208, 2024 | 9 | 2024 |
| A graph-based approach for integrating biological heterogeneous data based on connecting ontology S Zhang, Y Tang, J Yan, L Li, T Li, J Li, P Xie, Y Gu, J Xu, Z Feng, ... 2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2021 | 8 | 2021 |
| ACP-CapsPred: an explainable computational framework for identification and functional prediction of anticancer peptides based on capsule network L Yao, P Xie, J Guan, CR Chung, W Zhang, J Deng, Y Huang, YC Chiang, ... Briefings in Bioinformatics 25 (5), bbae460, 2024 | 4 | 2024 |
| CapsEnhancer: an effective computational framework for identifying enhancers based on chaos game representation and capsule network L Yao, P Xie, J Guan, CR Chung, Y Huang, Y Pang, H Wu, YC Chiang, ... Journal of Chemical Information and Modeling 64 (14), 5725-5736, 2024 | 3 | 2024 |
| Caps-ac4C: an effective computational framework for identifying N4-acetylcytidine sites in human mRNA based on deep learning L Yao, P Xie, D Dong, Y Guo, J Guan, W Zhang, CR Chung, Z Zhao, ... Journal of Molecular Biology, 168961, 2025 | 1 | 2025 |
| DeepKlapred: A deep learning framework for identifying protein lysine lactylation sites via multi-view feature fusion J Guan, P Xie, D Dong, Q Liu, Z Zhao, Y Guo, Y Zhang, TY Lee, L Yao, ... International Journal of Biological Macromolecules 283, 137668, 2024 | 1 | 2024 |
| StackDILI: Enhancing Drug-Induced Liver Injury Prediction through Stacking Strategy with Effective Molecular Representations J Guan, D Dong, P Xie, Z Zhao, Y Guo, TY Lee, L Yao, YC Chiang Journal of Chemical Information and Modeling, 2025 | | 2025 |
| dbAMP 3.0: updated resource of antimicrobial activity and structural annotation of peptides in the post-pandemic era L Yao, J Guan, P Xie, CR Chung, Z Zhao, D Dong, Y Guo, W Zhang, ... Nucleic Acids Research 53 (D1), D364-D376, 2025 | | 2025 |
| CAP-m7G: A capsule network-based framework for specific RNA N7-methylguanosine site identification using image encoding and reconstruction layers P Xie, J Guan, X He, Z Zhao, Y Guo, Z Sun, L Yao, TY Lee, YC Chiang Computational and Structural Biotechnology Journal 27, 804-812, 2025 | | 2025 |
Ying-Chih ChiangThe Chinese University of Hong Kong (Shenzhen)Dirección de correo verificada de cuhk.edu.cn
