| A global reference for human genetic variation 1000 Genomes Project Consortium Nature 526 (7571), 68, 2015 | 15863 | 2015 |
| A map of human genome variation from population scale sequencing 1000 Genomes Project Consortium Nature 467 (7319), 1061, 2010 | 8904 | 2010 |
| An integrated map of genetic variation from 1,092 human genomes 1000 Genomes Project Consortium Nature 491 (7422), 56, 2012 | 8528 | 2012 |
| Multi-platform discovery of haplotype-resolved structural variation in human genomes MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, ... Nature communications 10 (1), 1784, 2019 | 814 | 2019 |
| Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel O Delaneau, J Marchini Nature communications 5 (1), 3934, 2014 | 458 | 2014 |
| MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping WP Lee, MP Stromberg, A Ward, C Stewart, EP Garrison, GT Marth PloS one 9 (3), e90581, 2014 | 355 | 2014 |
| A comprehensive map of mobile element insertion polymorphisms in humans C Stewart, D Kural, MP Strömberg, JA Walker, MK Konkel, AM Stütz, ... PLoS genetics 7 (8), e1002236, 2011 | 326 | 2011 |
| SSW library: an SIMD Smith-Waterman C/C++ library for use in genomic applications M Zhao, WP Lee, EP Garrison, GT Marth PloS one 8 (12), e82138, 2013 | 266 | 2013 |
| Fast and accurate genomic analyses using genome graphs G Rakocevic, V Semenyuk, WP Lee, J Spencer, J Browning, IJ Johnson, ... Nature genetics 51 (2), 354-362, 2019 | 214 | 2019 |
| Human-specific tandem repeat expansion and differential gene expression during primate evolution A Sulovari, R Li, PA Audano, D Porubsky, MR Vollger, GA Logsdon, ... Proceedings of the National Academy of Sciences 116 (46), 23243-23253, 2019 | 102 | 2019 |
| Expectations and blind spots for structural variation detection from long-read assemblies and short-read genome sequencing technologies X Zhao, RL Collins, WP Lee, AM Weber, Y Jun, Q Zhu, B Weisburd, ... The American Journal of Human Genetics 108 (5), 919-928, 2021 | 98 | 2021 |
| Voltage island aware floorplanning for power and timing optimization WP Lee, HY Liu, YW Chang Proceedings of the 2006 IEEE/ACM international conference on Computer-aided …, 2006 | 95 | 2006 |
| One reference genome is not enough X Yang, WP Lee, K Ye, C Lee Genome biology 20, 1-3, 2019 | 77 | 2019 |
| An ILP algorithm for post-floorplanning voltage-island generation considering power-network planning WP Lee, HY Liu, YW Chang 2007 IEEE/ACM International Conference on Computer-Aided Design, 650-655, 2007 | 70 | 2007 |
| Tangram: a comprehensive toolbox for mobile element insertion detection J Wu, WP Lee, A Ward, JA Walker, MK Konkel, MA Batzer, GT Marth BMC genomics 15, 1-15, 2014 | 69 | 2014 |
| FusorSV: an algorithm for optimally combining data from multiple structural variation detection methods T Becker, WP Lee, J Leone, Q Zhu, C Zhang, S Liu, J Sargent, K Shanker, ... Genome biology 19, 1-14, 2018 | 63 | 2018 |
| Assembly of 43 human Y chromosomes reveals extensive complexity and variation P Hallast, P Ebert, M Loftus, F Yilmaz, PA Audano, GA Logsdon, ... Nature 621 (7978), 355-364, 2023 | 46 | 2023 |
| Systems and methods for adaptive local alignment for graph genomes K Ghose, WP Lee US Patent App. 14/990,323, 2017 | 41 | 2017 |
| Systems and methods for epigenetic analysis D Locke, WP Lee US Patent 10,793,895, 2020 | 38 | 2020 |
| Systems and methods for analyzing circulating tumor DNA WP Lee, D Locke US Patent 10,364,468, 2019 | 34 | 2019 |