Nanopore adaptive sampling: a tool for enrichment of low abundance species in metagenomic samples S Martin, D Heavens, Y Lan, S Horsfield, MD Clark, RM Leggett
Genome biology 23 (1), 11, 2022
147 2022 Rapid MinION profiling of preterm microbiota and antimicrobial-resistant pathogens RM Leggett, C Alcon-Giner, D Heavens, S Caim, TC Brook, M Kujawska, ...
Nature microbiology 5 (3), 430-442, 2020
140 2020 Alvis: a tool for contig and read ALignment VISualisation and chimera detection S Martin, RM Leggett
BMC bioinformatics 22, 1-10, 2021
21 2021 How low can you go? Driving down the DNA input requirements for nanopore sequencing D Heavens, D Chooneea, M Giolai, P Cuber, P Aanstad, S Martin, ...
BioRxiv, 2021.10. 15.464554, 2021
14 2021 Measuring air metagenomic diversity in an agricultural ecosystem M Giolai, W Verweij, S Martin, N Pearson, P Nicholson, RM Leggett, ...
Current Biology 34 (16), 3778-3791. e4, 2024
7 2024 Capturing variation in metagenomic assembly graphs with MetaCortex S Martin, M Ayling, L Patrono, M Caccamo, P Murcia, RM Leggett
Bioinformatics 39 (1), btad020, 2023
7 2023 Algebraic invariants for inferring 4-leaf semi-directed phylogenetic networks S Martin, V Moulton, RM Leggett
bioRxiv, 2023.09. 11.557152, 2023
6 2023 Dimensions of level-1 group-based phylogenetic networks E Gross, R Krone, S Martin
Bulletin of Mathematical Biology 86 (8), 90, 2024
4 2024 The Pfaffian Structure of CFN Phylogenetic Networks J Cummings, E Gross, B Hollering, S Martin, I Nometa
arXiv preprint arXiv:2312.07450, 2023
2 2023 On certain tilting modules for SL2 S Martin
Journal of Algebra 506, 397-408, 2018
2 2018 Squirrel: Reconstructing semi-directed phylogenetic level-1 networks from four-leaved networks or sequence alignments N Holtgrefe, KT Huber, L van Iersel, M Jones, S Martin, V Moulton
bioRxiv, 2024.11. 01.621567, 2024
1 2024 A Clebsch-Gordan decomposition in positive characteristic S Donkin, S Martin
Journal of Algebra 560, 680-699, 2020
1 2020 On the Clebsch-Gordan Problem in Prime Characteristic S Martin
University of York, 2018
1 2018 Group-Based Phylogenetic Models on 3-Sunlet Networks S Cox, E Gross, S Martin
arXiv preprint arXiv:2409.17894, 2024
2024 A Comparison of Nanopore Data Types, Basecalling, and Assembly Algorithms: Whole Plant Genome Assembly and Methylation Analysis from a Single MinION Flow cell S Martin, D Heavens, Y Lan, N Peel, N Irish, S Horsfield, M Giolai, ...
bioRxiv, 2024.11. 13.623402, 2024
2024 On certain tilting modules for II S Martin
arXiv preprint arXiv:2004.01153, 2020
2020