Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data CS Chin, DH Alexander, P Marks, AA Klammer, J Drake, C Heiner, ... Nature methods 10 (6), 563-569, 2013 | 4474 | 2013 |
The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes D Floudas, M Binder, R Riley, K Barry, RA Blanchette, B Henrissat, ... Science 336 (6089), 1715-1719, 2012 | 1854 | 2012 |
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ... Nature biotechnology 35 (8), 725-731, 2017 | 1731 | 2017 |
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea D Wu, P Hugenholtz, K Mavromatis, R Pukall, E Dalin, NN Ivanova, ... Nature 462 (7276), 1056-1060, 2009 | 1093 | 2009 |
Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists A Kohler, A Kuo, LG Nagy, E Morin, KW Barry, F Buscot, B Canbäck, ... Nature genetics 47 (4), 410-415, 2015 | 1046 | 2015 |
Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi RA Ohm, N Feau, B Henrissat, CL Schoch, BA Horwitz, KW Barry, ... PLoS pathogens 8 (12), e1003037, 2012 | 639 | 2012 |
A bioinformatician's guide to metagenomics V Kunin, A Copeland, A Lapidus, K Mavromatis, P Hugenholtz Microbiology and molecular biology reviews 72 (4), 557-578, 2008 | 600 | 2008 |
Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000 H Feil, WS Feil, P Chain, F Larimer, G DiBartolo, A Copeland, A Lykidis, ... Proceedings of the National Academy of Sciences 102 (31), 11064-11069, 2005 | 540 | 2005 |
The DNA sequence and biology of human chromosome 19 J Grimwood, LA Gordon, A Olsen, A Terry, J Schmutz, J Lamerdin, ... Nature 428 (6982), 529-535, 2004 | 402 | 2004 |
Assembling the marine metagenome, one cell at a time T Woyke, G Xie, A Copeland, JM Gonzalez, C Han, H Kiss, JH Saw, ... PloS one 4 (4), e5299, 2009 | 399 | 2009 |
Phylogenetic and phylogenomic overview of the Polyporales M Binder, A Justo, R Riley, A Salamov, F Lopez-Giraldez, E Sjökvist, ... Mycologia 105 (6), 1350-1373, 2013 | 375 | 2013 |
High-resolution metagenomics targets specific functional types in complex microbial communities MG Kalyuzhnaya, A Lapidus, N Ivanova, AC Copeland, AC McHardy, ... Nature biotechnology 26 (9), 1029-1034, 2008 | 314 | 2008 |
Deinococcus geothermalis: The Pool of Extreme Radiation Resistance Genes Shrinks KS Makarova, MV Omelchenko, EK Gaidamakova, VY Matrosova, ... PLoS One 2 (9), e955, 2007 | 297 | 2007 |
High-resolution phylogenetic microbial community profiling E Singer, B Bushnell, D Coleman-Derr, B Bowman, RM Bowers, A Levy, ... The ISME journal 10 (8), 2020-2032, 2016 | 267 | 2016 |
One bacterial cell, one complete genome T Woyke, D Tighe, K Mavromatis, A Clum, A Copeland, W Schackwitz, ... PloS one 5 (4), e10314, 2010 | 264 | 2010 |
Comparative Genome Structure, Secondary Metabolite, and Effector Coding Capacity across Cochliobolus Pathogens BJ Condon, Y Leng, D Wu, KE Bushley, RA Ohm, R Otillar, J Martin, ... PLoS genetics 9 (1), e1003233, 2013 | 257 | 2013 |
Genome Sequence and Analysis of the Soil Cellulolytic Actinomycete Thermobifida fusca YX A Lykidis, K Mavromatis, N Ivanova, I Anderson, M Land, G DiBartolo, ... Journal of bacteriology 189 (6), 2477-2486, 2007 | 237 | 2007 |
A mouse model for human norovirus S Taube, AO Kolawole, M Höhne, JE Wilkinson, SA Handley, JW Perry, ... MBio 4 (4), 10.1128/mbio. 00450-13, 2013 | 183 | 2013 |
Bacterial genomic DNA isolation using CTAB S William, H Feil, A Copeland Sigma 50 (6876), 2012 | 176 | 2012 |
The fast changing landscape of sequencing technologies and their impact on microbial genome assemblies and annotation K Mavromatis, ML Land, TS Brettin, DJ Quest, A Copeland, A Clum, ... PloS one 7 (12), e48837, 2012 | 175 | 2012 |