| OrthoMCL: identification of ortholog groups for eukaryotic genomes L Li, CJ Stoeckert, DS Roos Genome research 13 (9), 2178-2189, 2003 | 6257 | 2003 |
| Minimum information about a microarray experiment (MIAME)—toward standards for microarray data A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ... Nature genetics 29 (4), 365-371, 2001 | 4964 | 2001 |
| PlasmoDB: a functional genomic database for malaria parasites C Aurrecoechea, J Brestelli, BP Brunk, J Dommer, S Fischer, B Gajria, ... Nucleic acids research 37 (suppl_1), D539-D543, 2009 | 1273 | 2009 |
| TriTrypDB: a functional genomic resource for the Trypanosomatidae M Aslett, C Aurrecoechea, M Berriman, J Brestelli, BP Brunk, M Carrington, ... Nucleic acids research 38 (suppl_1), D457-D462, 2010 | 1054 | 2010 |
| Comparative genomics of the neglected human malaria parasite Plasmodium vivax JM Carlton, JH Adams, JC Silva, SL Bidwell, H Lorenzi, E Caler, ... Nature 455 (7214), 757-763, 2008 | 1004 | 2008 |
| OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups F Chen, AJ Mackey, CJ Stoeckert Jr, DS Roos Nucleic acids research 34 (suppl_1), D363-D368, 2006 | 989 | 2006 |
| PPARγ and C/EBP factors orchestrate adipocyte biology via adjacent binding on a genome-wide scale MI Lefterova, Y Zhang, DJ Steger, M Schupp, J Schug, A Cristancho, ... Genes & development 22 (21), 2941-2952, 2008 | 947 | 2008 |
| Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project CF Taylor, D Field, SA Sansone, J Aerts, R Apweiler, M Ashburner, ... Nature biotechnology 26 (8), 889-896, 2008 | 626 | 2008 |
| Prevention of islet allograft rejection with engineered myoblasts expressing FasL in mice HT Lau, M Yu, A Fontana, CJ Stoeckert Jr Science 273 (5271), 109-112, 1996 | 604 | 1996 |
| Design and implementation of microarray gene expression markup language (MAGE-ML) PT Spellman, M Miller, J Stewart, C Troup, U Sarkans, S Chervitz, ... Genome biology 3, 1-9, 2002 | 598 | 2002 |
| ToxoDB: an integrated Toxoplasma gondii database resource B Gajria, A Bahl, J Brestelli, J Dommer, S Fischer, X Gao, M Heiges, ... Nucleic acids research 36 (suppl_1), D553-D556, 2007 | 555 | 2007 |
| Promoter features related to tissue specificity as measured by Shannon entropy J Schug, WP Schuller, C Kappen, JM Salbaum, M Bucan, CJ Stoeckert Genome biology 6, 1-24, 2005 | 506 | 2005 |
| Using OrthoMCL to assign proteins to OrthoMCL‐DB groups or to cluster proteomes into new ortholog groups S Fischer, BP Brunk, F Chen, X Gao, OS Harb, JB Iodice, D Shanmugam, ... Current protocols in bioinformatics 35 (1), 6.12. 1-6.12. 19, 2011 | 493 | 2011 |
| Coexisting proinflammatory and antioxidative endothelial transcription profiles in a disturbed flow region of the adult porcine aorta AG Passerini, DC Polacek, C Shi, NM Francesco, E Manduchi, GR Grant, ... Proceedings of the National Academy of Sciences 101 (8), 2482-2487, 2004 | 461 | 2004 |
| PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data A Bahl, B Brunk, J Crabtree, MJ Fraunholz, B Gajria, GR Grant, ... Nucleic acids research 31 (1), 212-215, 2003 | 456 | 2003 |
| Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM) GR Grant, MH Farkas, AD Pizarro, NF Lahens, J Schug, BP Brunk, ... Bioinformatics 27 (18), 2518-2528, 2011 | 412 | 2011 |
| The ontology for biomedical investigations A Bandrowski, R Brinkman, M Brochhausen, MH Brush, B Bug, ... PloS one 11 (4), e0154556, 2016 | 405 | 2016 |
| Defining the mammalian CArGome Q Sun, G Chen, JW Streb, X Long, Y Yang, CJ Stoeckert, JM Miano Genome research 16 (2), 197-207, 2006 | 396 | 2006 |
| VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center B Amos, C Aurrecoechea, M Barba, A Barreto, EY Basenko, R Belnap, ... Nucleic acids research 50 (D1), D898-D911, 2022 | 368 | 2022 |
| FungiDB: an integrated bioinformatic resource for fungi and oomycetes EY Basenko, JA Pulman, A Shanmugasundram, OS Harb, K Crouch, ... Journal of Fungi 4 (1), 39, 2018 | 329 | 2018 |
