Feng Ding

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Nikolay DokholyanG. Thomas Passananti ProfessorDirección de correo verificada de psu.edu
Pu Chun KeProfessor (Research), Monash UniversityDirección de correo verificada de monash.edu
Thomas Paul DavisAIBN, The University of QueenslandDirección de correo verificada de uq.edu.au
Yunxiang SunNingbo UniversityDirección de correo verificada de nbu.edu.cn
Kakinen AleksandrUniversity of QueenslandDirección de correo verificada de uq.edu.au
Ibrahim JavedThe University of QueenslandDirección de correo verificada de uq.edu.au
Emily H PilkingtonResearch Fellow, Monash Institute of Pharmaceutical SciencesDirección de correo verificada de monash.edu
H. Eugene StanleyProfessor of Physics, Boston UniversityDirección de correo verificada de bu.edu
Nicholas AndrikopoulosResearch Fellow, Department of Materials Science and Engineering, Monash UniversityDirección de correo verificada de monash.edu
Yanting XingPostdoctoral Researcher, Texas State UniversityDirección de correo verificada de txstate.edu
Yuhuan LiAssociate Professor, Zhongshan Hospital, Fudan UniversityDirección de correo verificada de zs-hospital.sh.cn
Praveen Nedumpully-GovindanDirección de correo verificada de utexas.edu
Sijie Lin 林思劼Tongji UniversityDirección de correo verificada de tongji.edu.cn
Pengyu ChenAssociate ProfessorDirección de correo verificada de auburn.edu
Eugene ShakhnovichProfessor of Chemistry Harvard UniversityDirección de correo verificada de chemistry.harvard.edu
Shantanu SharmaFounder at Sharma LabsDirección de correo verificada de alumni.unc.edu
Aparna Nandakumar, PhDDirección de correo verificada de monash.edu
Ava FaridiMonash UniversityDirección de correo verificada de hudson.org.au
Guotao PengTongji University; Karolinska InstitutetDirección de correo verificada de tongji.edu.cn
Sagar KhareAssistant Professor of Chemistry and Chemical Biology, Rutgers UniversityDirección de correo verificada de rutgers.edu

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Feng Ding

Professor of Physics, Clemson University

Dirección de correo verificada de clemson.edu - Página principal

Computational biophysics Computational Nanoscience Amyloidosis Amyloid Amyloid Aggregation


Título Ordenar por citas Ordenar por año Ordenar por título	Citado por Citado por	Año
Eris: an automated estimator of protein stability S Yin, F Ding, NV Dokholyan Nature methods 4 (6), 466-468, 2007	455	2007
Topological determinants of protein folding NV Dokholyan, L Li, F Ding, EI Shakhnovich Proceedings of the National Academy of Sciences 99 (13), 8637-8641, 2002	358	2002
Mechanism for the α‐helix to β‐hairpin transition F Ding, JM Borreguero, SV Buldyrey, HE Stanley, NV Dokholyan Proteins: Structure, Function, and Bioinformatics 53 (2), 220-228, 2003	352	2003
Ab initio folding of proteins with all-atom discrete molecular dynamics F Ding, D Tsao, H Nie, NV Dokholyan Structure 16 (7), 1010-1018, 2008	348	2008
Status of GPCR modeling and docking as reflected by community-wide GPCR Dock 2010 assessment I Kufareva, M Rueda, V Katritch, G Dock, RC Stevens, R Abagyan Structure 19 (8), 1108-1126, 2011	343	2011
Automated minimization of steric clashes in protein structures S Ramachandran, P Kota, F Ding, NV Dokholyan Proteins: Structure, Function, and Bioinformatics 79 (1), 261-270, 2011	332	2011
Ab initio RNA folding by discrete molecular dynamics: from structure prediction to folding mechanisms F Ding, S Sharma, P Chalasani, VV Demidov, NE Broude, NV Dokholyan Rna 14 (6), 1164-1173, 2008	321	2008
Implications of peptide assemblies in amyloid diseases PC Ke, MA Sani, F Ding, A Kakinen, I Javed, F Separovic, TP Davis, ... Chemical Society Reviews 46 (21), 6492-6531, 2017	311	2017
Community-wide assessment of GPCR structure modelling and ligand docking: GPCR Dock 2008 M Michino, E Abola, G Dock, CL Brooks III, JS Dixon, J Moult, RC Stevens Nature Reviews Drug Discovery 8 (6), 455, 2009	305	2009
RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure prediction JA Cruz, MF Blanchet, M Boniecki, JM Bujnicki, SJ Chen, S Cao, R Das, ... Rna 18 (4), 610-625, 2012	301	2012
iFoldRNA: three-dimensional RNA structure prediction and folding S Sharma, F Ding, NV Dokholyan Bioinformatics 24 (17), 1951-1952, 2008	266	2008
Molecular dynamics simulation of amyloid β dimer formation B Urbanc, L Cruz, F Ding, D Sammond, S Khare, SV Buldyrev, HE Stanley, ... Biophysical journal 87 (4), 2310-2321, 2004	255	2004
Emergence of protein fold families through rational design F Ding, NV Dokholyan PLoS Comput Biol 2 (7), e85, 2006	235	2006
Engineered allosteric activation of kinases in living cells AV Karginov, F Ding, P Kota, NV Dokholyan, KM Hahn Nature biotechnology 28 (7), 743, 2010	234	2010
Discrete molecular dynamics: an efficient and versatile simulation method for fine protein characterization D Shirvanyants, F Ding, D Tsao, S Ramachandran, NV Dokholyan The journal of physical chemistry B 116 (29), 8375-8382, 2012	222	2012
Molecular dynamics simulation of the SH3 domain aggregation suggests a generic amyloidogenesis mechanism F Ding, NV Dokholyan, SV Buldyrev, HE Stanley, EI Shakhnovich Journal of molecular biology 324 (4), 851-857, 2002	195	2002
RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme Z Miao, RW Adamiak, M Antczak, RT Batey, AJ Becka, M Biesiada, ... RNA 23 (5), 655-672, 2017	194	2017
RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures Z Miao, RW Adamiak, MF Blanchet, M Boniecki, JM Bujnicki, SJ Chen, ... Rna 21 (6), 1066-1084, 2015	190	2015
Modeling backbone flexibility improves protein stability estimation S Yin, F Ding, NV Dokholyan Structure 15 (12), 1567-1576, 2007	190	2007
Dynamical roles of metal ions and the disulfide bond in Cu, Zn superoxide dismutase folding and aggregation F Ding, NV Dokholyan Proceedings of the National Academy of Sciences 105 (50), 19696-19701, 2008	181	2008

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