| MultiSeq: unifying sequence and structure data for evolutionary analysis E Roberts, J Eargle, D Wright, Z Luthey-Schulten BMC bioinformatics 7, 1-11, 2006 | 447 | 2006 |
| Determining the stability of genetic switches: explicitly accounting for mRNA noise M Assaf, E Roberts, Z Luthey-Schulten Physical review letters 106 (24), 248102, 2011 | 147 | 2011 |
| Lattice microbes: High‐performance stochastic simulation method for the reaction‐diffusion master equation E Roberts, JE Stone, Z Luthey‐Schulten Journal of computational chemistry 34 (3), 245-255, 2013 | 146 | 2013 |
| Molecular signatures of ribosomal evolution E Roberts, A Sethi, J Montoya, CR Woese, Z Luthey-Schulten Proceedings of the National Academy of Sciences 105 (37), 13953-13958, 2008 | 141 | 2008 |
| Noise contributions in an inducible genetic switch: a whole-cell simulation study E Roberts, A Magis, JO Ortiz, W Baumeister, Z Luthey-Schulten PLoS computational biology 7 (3), e1002010, 2011 | 127 | 2011 |
| Heterogeneity in protein expression induces metabolic variability in a modeled Escherichia coli population P Labhsetwar, JA Cole, E Roberts, ND Price, ZA Luthey-Schulten Proceedings of the National Academy of Sciences 110 (34), 14006-14011, 2013 | 113 | 2013 |
| Extrinsic noise driven phenotype switching in a self-regulating gene M Assaf, E Roberts, Z Luthey-Schulten, N Goldenfeld Physical review letters 111 (5), 058102, 2013 | 109 | 2013 |
| Cooperation dilemma in finite populations under fluctuating environments M Assaf, M Mobilia, E Roberts Physical review letters 111 (23), 238101, 2013 | 89 | 2013 |
| Dynamics of simple gene-network motifs subject to extrinsic fluctuations E Roberts, S Be'er, C Bohrer, R Sharma, M Assaf Physical Review E 92 (6), 062717, 2015 | 58 | 2015 |
| Simulation of reaction diffusion processes over biologically relevant size and time scales using multi-GPU workstations MJ Hallock, JE Stone, E Roberts, C Fry, Z Luthey-Schulten Parallel computing 40 (5-6), 86-99, 2014 | 56 | 2014 |
| DNA looping increases the range of bistability in a stochastic model of the lac genetic switch TM Earnest, E Roberts, M Assaf, K Dahmen, Z Luthey-Schulten Physical biology 10 (2), 026002, 2013 | 53 | 2013 |
| Long time-scale simulations of in vivo diffusion using GPU hardware E Roberts, JE Stone, L Sepúlveda, WMW Hwu, Z Luthey-Schulten 2009 IEEE International Symposium on Parallel & Distributed Processing, 1-8, 2009 | 51 | 2009 |
| A pairwise distance distribution correction (DDC) algorithm to eliminate blinking-caused artifacts in SMLM CH Bohrer, X Yang, S Thakur, X Weng, B Tenner, R McQuillen, B Ross, ... Nature methods 18 (6), 669-677, 2021 | 47* | 2021 |
| Neural network control of focal position during time-lapse microscopy of cells L Wei, E Roberts Scientific reports 8 (1), 7313, 2018 | 35 | 2018 |
| Natural variation in stochastic photoreceptor specification and color preference in Drosophila C Anderson, I Reiss, C Zhou, A Cho, H Siddiqi, B Mormann, CM Avelis, ... Elife 6, e29593, 2017 | 32 | 2017 |
| Horizontal gene transfer of zinc and non-zinc forms of bacterial ribosomal protein S4 K Chen, E Roberts, Z Luthey-Schulten BMC evolutionary biology 9, 1-17, 2009 | 29 | 2009 |
| Cytochrome c2 exit strategy: dissociation studies and evolutionary implications TV Pogorelov, F Autenrieth, E Roberts, ZA Luthey-Schulten The Journal of Physical Chemistry B 111 (3), 618-634, 2007 | 29 | 2007 |
| The Chd1 chromatin remodeler can sense both entry and exit sides of the nucleosome IM Nodelman, KC Horvath, RF Levendosky, J Winger, R Ren, A Patel, ... Nucleic Acids Research 44 (16), 7580-7591, 2016 | 26 | 2016 |
| Biospark: scalable analysis of large numerical datasets from biological simulations and experiments using Hadoop and Spark M Klein, R Sharma, CH Bohrer, CM Avelis, E Roberts Bioinformatics 33 (2), 303-305, 2017 | 24 | 2017 |
| A biophysical model of supercoiling dependent transcription predicts a structural aspect to gene regulation CH Bohrer, E Roberts BMC biophysics 9, 1-13, 2015 | 23 | 2015 |
John E. StoneDistinguished Engineer, Scientific Visualization DevTech, NVIDIA CorporationDirección de correo verificada de nvidia.com