Population genomics of domestic and wild yeasts G Liti, DM Carter, AM Moses, J Warringer, L Parts, SA James, RP Davey, ... Nature 458 (7236), 337-341, 2009 | 1696 | 2009 |
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations BJ Clavijo, L Venturini, C Schudoma, GG Accinelli, G Kaithakottil, J Wright, ... Genome research 27 (5), 885-896, 2017 | 431 | 2017 |
Sequencing quality assessment tools to enable data-driven informatics for high throughput genomics RM Leggett, RH Ramirez-Gonzalez, BJ Clavijo, D Waite, RP Davey Frontiers in genetics 4, 288, 2013 | 237 | 2013 |
Population genomic analysis of Aegilops tauschii identifies targets for bread wheat improvement K Gaurav, S Arora, P Silva, J Sánchez-Martín, R Horsnell, L Gao, GS Brar, ... Nature biotechnology 40 (3), 422-431, 2022 | 159 | 2022 |
Repetitive sequence variation and dynamics in the ribosomal DNA array of Saccharomyces cerevisiae as revealed by whole-genome resequencing SA James, MJT O'Kelly, DM Carter, RP Davey, A van Oudenaarden, ... Genome Research 19 (4), 626-635, 2009 | 110 | 2009 |
NanoOK: multi-reference alignment analysis of nanopore sequencing data, quality and error profiles RM Leggett, D Heavens, M Caccamo, MD Clark, RP Davey Bioinformatics 32 (1), 142-144, 2016 | 87 | 2016 |
CropSight: a scalable and open-source information management system for distributed plant phenotyping and IoT-based crop management D Reynolds, J Ball, A Bauer, R Davey, S Griffiths, J Zhou Gigascience 8 (3), giz009, 2019 | 86 | 2019 |
Standards recommendations for the earth BioGenome project MKN Lawniczak, R Durbin, P Flicek, K Lindblad-Toh, X Wei, JM Archibald, ... Proceedings of the National Academy of Sciences 119 (4), e2115639118, 2022 | 71 | 2022 |
LotuS2: an ultrafast and highly accurate tool for amplicon sequencing analysis E Özkurt, J Fritscher, N Soranzo, DYK Ng, RP Davey, M Bahram, ... Microbiome 10 (1), 176, 2022 | 51 | 2022 |
CerealsDB 3.0: expansion of resources and data integration PA Wilkinson, MO Winfield, GLA Barker, S Tyrrell, X Bian, AM Allen, ... BMC bioinformatics 17, 1-9, 2016 | 49 | 2016 |
Data management and best practice for plant science S Leonelli, RP Davey, E Arnaud, G Parry, R Bastow Nature Plants 3 (6), 1-4, 2017 | 47 | 2017 |
An open science peer review oath J Aleksic, A Alexa, TK Attwood, NC Hong, M Dahlö, R Davey, H Dinkel, ... F1000Research 3, 2014 | 42 | 2014 |
Norwich COVID-19 testing initiative pilot: evaluating the feasibility of asymptomatic testing on a university campus TB Gillam, J Cole, K Gharbi, E Angiolini, T Barker, P Bickerton, T Brabbs, ... Journal of Public Health 43 (1), 82-88, 2021 | 40 | 2021 |
Ribosomal DNA sequence heterogeneity reflects intraspecies phylogenies and predicts genome structure in two contrasting yeast species C West, SA James, RP Davey, J Dicks, IN Roberts Systematic Biology 63 (4), 543-554, 2014 | 37 | 2014 |
Data management challenges for artificial intelligence in plant and agricultural research HF Williamson, J Brettschneider, M Caccamo, RP Davey, C Goble, ... F1000Research 10, 2021 | 34 | 2021 |
COPO: a metadata platform for brokering FAIR data in the life sciences F Shaw, A Etuk, A Minotto, A Gonzalez-Beltran, D Johnson, ... F1000Research 9 (495), 495, 2020 | 33 | 2020 |
ISA API: An open platform for interoperable life science experimental metadata D Johnson, D Batista, K Cochrane, RP Davey, A Etuk, A Gonzalez-Beltran, ... GigaScience 10 (9), giab060, 2021 | 24 | 2021 |
Leaf LIMS: A flexible laboratory information management system with a synthetic biology focus T Craig, R Holland, R D’Amore, JR Johnson, HV McCue, A West, ... ACS Synthetic Biology 6 (12), 2273-2280, 2017 | 23 | 2017 |
Developing data interoperability using standards: a wheat community use case ED Yeumo, M Alaux, E Arnaud, S Aubin, U Baumann, P Buche, L Cooper, ... F1000Research 6, 2017 | 23 | 2017 |
StatsDB: platform-agnostic storage and understanding of next generation sequencing run metrics RH Ramirez-Gonzalez, RM Leggett, D Waite, A Thanki, N Drou, ... F1000Research 2, 248, 2014 | 23 | 2014 |