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Matthew L Speir
Matthew L Speir
Other namesMatthew Speir
PhD Student, History Department, UC Davis
Verified email at ucdavis.edu
Title
Cited by
Cited by
Year
The UCSC genome browser database: 2015 update
KR Rosenbloom, J Armstrong, GP Barber, J Casper, H Clawson, ...
Nucleic acids research 43 (D1), D670-D681, 2015
10942015
The UCSC genome browser database: 2019 update
M Haeussler, AS Zweig, C Tyner, ML Speir, KR Rosenbloom, BJ Raney, ...
Nucleic acids research 47 (D1), D853-D858, 2019
8052019
The UCSC genome browser database: 2014 update
D Karolchik, GP Barber, J Casper, H Clawson, MS Cline, M Diekhans, ...
Nucleic acids research 42 (D1), D764-D770, 2014
7772014
The UCSC genome browser database: 2018 update
J Casper, AS Zweig, C Villarreal, C Tyner, ML Speir, KR Rosenbloom, ...
Nucleic acids research 46 (D1), D762-D769, 2018
5172018
The UCSC genome browser database: 2016 update
ML Speir, AS Zweig, KR Rosenbloom, BJ Raney, B Paten, P Nejad, ...
Nucleic acids research 44 (D1), D717-D725, 2016
4432016
The UCSC genome browser database: 2021 update
J Navarro Gonzalez, AS Zweig, ML Speir, D Schmelter, KR Rosenbloom, ...
Nucleic acids research 49 (D1), D1046-D1057, 2021
4422021
The UCSC genome browser database: 2017 update
C Tyner, GP Barber, J Casper, H Clawson, M Diekhans, C Eisenhart, ...
Nucleic acids research 45 (D1), D626-D634, 2017
3872017
The UCSC genome browser database: 2023 update
LR Nassar, GP Barber, A Benet-Pagès, J Casper, H Clawson, ...
Nucleic acids research 51 (D1), D1188-D1195, 2023
3262023
The UCSC genome browser database: 2022 update
BT Lee, GP Barber, A Benet-Pagès, J Casper, H Clawson, M Diekhans, ...
Nucleic acids research 50 (D1), D1115-D1122, 2022
2382022
UCSC Genome Browser enters 20th year
CM Lee, GP Barber, J Casper, H Clawson, M Diekhans, JN Gonzalez, ...
Nucleic acids research 48 (D1), D756-D761, 2020
2032020
UCSC cell browser: visualize your single-cell data
ML Speir, A Bhaduri, NS Markov, P Moreno, TJ Nowakowski, ...
Bioinformatics 37 (23), 4578-4580, 2021
1712021
Human microglia states are conserved across experimental models and regulate neural stem cell responses in chimeric organoids
G Popova, SS Soliman, CN Kim, MG Keefe, KM Hennick, S Jain, T Li, ...
Cell Stem Cell 28 (12), 2153-2166. e6, 2021
1252021
Modeling human TBX5 haploinsufficiency predicts regulatory networks for congenital heart disease
IS Kathiriya, KS Rao, G Iacono, WP Devine, AP Blair, SK Hota, MH Lai, ...
Developmental cell 56 (3), 292-309. e9, 2021
822021
UCSC data integrator and variant annotation integrator
AS Hinrichs, BJ Raney, ML Speir, B Rhead, J Casper, D Karolchik, ...
Bioinformatics 32 (9), 1430-1432, 2016
732016
Navigating protected genomics data with UCSC Genome Browser in a Box
M Haeussler, BJ Raney, AS Hinrichs, H Clawson, AS Zweig, D Karolchik, ...
Bioinformatics 31 (5), 764-766, 2015
662015
The UCSC Genome Browser database: 2024 update
BJ Raney, GP Barber, A Benet-Pagès, J Casper, H Clawson, MS Cline, ...
Nucleic Acids Research 52 (D1), D1082-D1088, 2024
642024
The UCSC Ebola genome portal
M Haeussler, D Karolchik, H Clawson, BJ Raney, KR Rosenbloom, ...
PLoS Currents 6, 2014
82014
GenArk: towards a million UCSC genome browsers
H Clawson, BT Lee, BJ Raney, GP Barber, J Casper, M Diekhans, ...
Genome Biology 24 (1), 217, 2023
42023
Molecular diversity and lineage commitment of human interneuron progenitors
D Velmeshev, M Chavali, TJ Nowakowski, M Bhade, S Mayer, N Goyal, ...
BioRxiv, 2021.05. 13.444045, 2021
42021
The UCSC Genome Browser database: 2025 update
G Perez, GP Barber, A Benet-Pages, J Casper, H Clawson, M Diekhans, ...
Nucleic Acids Research, gkae974, 2024
12024
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