| Bioinformatic Genome Comparisons for Taxonomic and Phylogenetic Assignments Using Aeromonas as a Test Case SM Colston, MS Fullmer, L Beka, B Lamy, JP Gogarten, J Graf MBio 5 (6), 10.1128/mbio. 02136-14, 2014 | 232* | 2014 |
| Leisingera sp. JC1, a Bacterial Isolate from Hawaiian Bobtail Squid Eggs, Produces Indigoidine and Differentially Inhibits Vibrios SM Gromek, AM Suria, MS Fullmer, JL Garcia, JP Gogarten, SV Nyholm, ... Frontiers in microbiology 7, 1342, 2016 | 88 | 2016 |
| The pan-genome as a shared genomic resource: mutual cheating, cooperation and the black queen hypothesis MS Fullmer, SM Soucy, JP Gogarten Frontiers in microbiology 6, 728, 2015 | 53 | 2015 |
| Population and genomic analysis of the genus Halorubrum MS Fullmer, SM Soucy, KS Swithers, AM Makkay, R Wheeler, A Ventosa, ... Frontiers in Microbiology 5, 140, 2014 | 50* | 2014 |
| Comparative genomics of Roseobacter clade bacteria isolated from the accessory nidamental gland of Euprymna scolopes AJ Collins, MS Fullmer, JP Gogarten, SV Nyholm Frontiers in Microbiology 6, 123, 2015 | 43 | 2015 |
| Improving phylogenies based on average nucleotide identity, incorporating saturation correction and nonparametric bootstrap support S Gosselin, MS Fullmer, Y Feng, JP Gogarten Systematic biology 71 (2), 396-409, 2022 | 42 | 2022 |
| The patchy distribution of restriction–modification system genes and the conservation of orphan methyltransferases in halobacteria MS Fullmer, M Ouellette, AS Louyakis, RT Papke, JP Gogarten Genes 10 (3), 233, 2019 | 37 | 2019 |
| Evidence from phylogenetic and genome fingerprinting analyses suggests rapidly changing variation in Halorubrum and Haloarcula populations N Ram Mohan, MS Fullmer, AM Makkay, R Wheeler, A Ventosa, A Naor, ... Frontiers in Microbiology 5, 143, 2014 | 30 | 2014 |
| Low-level antimicrobials in the medicinal leech select for resistant pathogens that spread to patients L Beka, MS Fullmer, SM Colston, MC Nelson, E Talagrand-Reboul, ... MBio 9 (4), 10.1128/mbio. 01328-18, 2018 | 29 | 2018 |
| Inteins as indicators of gene flow in the halobacteria SM Soucy, MS Fullmer, RT Papke, JP Gogarten Frontiers in microbiology 5, 299, 2014 | 28 | 2014 |
| Systematic detection of large-scale multigene horizontal transfer in prokaryotes L Kloub, S Gosselin, M Fullmer, J Graf, JP Gogarten, MS Bansal Molecular biology and evolution 38 (6), 2639-2659, 2021 | 20 | 2021 |
| Tertiary-interaction characters enable fast, model-based structural phylogenetics beyond the twilight zone C Puente-Lelievre, AJ Malik, J Douglas, D Ascher, M Baker, J Allison, ... bioRxiv, 2023.12. 12.571181, 2023 | 12 | 2023 |
| Bioinformatic genome comparisons for taxonomic and phylogenetic assignments using Aeromonas as a test case. mBio. 2014; 5 (6): e02136 SM Colston, MS Fullmer, L Beka, B Lamy, JP Gogarten, J Graf PubMed Abstract| Publisher Full Text| Free Full Text, 0 | 6 | |
| Horizontal gene transfer in halobacteria MS Fullmer, JP Gogarten, RT Papke Halophiles: Genetics and Genomics, 2014 | 2 | 2014 |
| The Constructive Black Queen hypothesis: new functions can evolve under conditions favouring gene loss N Takeuchi, MS Fullmer, DJ Maddock, AM Poole The ISME Journal 18 (1), wrae011, 2024 | 1 | 2024 |
| Expanding the utility of sequence comparisons using data from whole genomes S Gosselin, MS Fullmer, Y Feng, JP Gogarten bioRxiv, 2020.01. 15.908137, 2020 | 1 | 2020 |
| Interaction range of common goods shapes Black Queen dynamics beyond the cheater-cooperator narrative MS Fullmer, B van Dijk, N Takeuchi bioRxiv, 2024.07. 16.603646, 2024 | | 2024 |
| Phylogeny, Taxonomy, and the Concept of Lineage in the Presence of Horizontal Gene Transfer MS Fullmer University of Connecticut, 2018 | | 2018 |
| frontiers in ORIGINAL RESEARCH ARTICLE MICROBIOLOGY published: 26 June 2014 SM Soucy, MS Fullmer, RT Papke, JP Gogarten, JL Meyer, E Rd The Proceedings from Halophiles 2013, the International Congress on …, 2015 | | 2015 |
| Supplementary Information: The Constructive Black Queen hypothesis: new functions can evolve under conditions favouring gene loss. N Takeuchi, MS Fullmer, DJ Maddock, AM Poole | | |
Johann Peter GogartenBoT Distinguished Professor of Molecular and Cell Biology, University of ConnecticutVerified email at uconn.edu
