Scott Roy

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Manuel IrimiaCentre for Genomic RegulationVerified email at crg.eu
David PennyProfessor of theoretical Biology, Massey UniversityVerified email at massey.ac.nz
Jordi Garcia-FernàndezUniversitat de BarcelonaVerified email at ub.edu
Sandro José de SouzaProfessor Titular, Instituto do Cérebro - UFRNVerified email at neuro.ufrn.br
Graham E LarueBioinformatics scientistVerified email at mammothbiosci.com
Ignacio MaesoAssociate Professor & Group Leader at Genetics UBVerified email at ub.edu
Manyuan LongEdna K Papazian Distinguished Service Professor, University of ChicagoVerified email at uchicago.edu
Daniel L. HartlHiggins Professor of Biology, Harvard UniversityVerified email at oeb.harvard.edu
Bradley A BowserUniversity of California, MercedVerified email at ucmerced.edu
Jeppe VintherAssociate Professor, University of CopenhagenVerified email at bio.ku.dk
Hunter FraserProfessor of Biology, StanfordVerified email at stanford.edu
Jason E StajichProfessor, University of California, RiversideVerified email at ucr.edu
Ravinder SEHGALSan Francisco State UniversityVerified email at sfsu.edu
Wallace MarshallProfessor of Biochemisty & Biophysics, University of California San FranciscoVerified email at ucsf.edu
Robert KleinProfessor, Genetics and Genomic Sciences, Icahn School of Medicine at Mt. SinaiVerified email at mssm.edu
Gemma MarfanyProfessor of Genetics, Universitat de BarcelonaVerified email at ub.edu
Jose Luis FerranProfesor Titular, Universidad de MurciaVerified email at um.es
Jose Luis Gomez-SkarmetaCentro Andaluz de Biología del DesarrolloVerified email at upo.es
Marcelo Urbano FerreiraProfessor of Parasitology at the University of São Paulo, BrazilVerified email at usp.br
Daniel E. NeafseyHarvard TH Chan School of Public Health; Broad InstituteVerified email at broadinstitute.org

Scott Roy

Professor of Biology, San Francisco State University

Verified email at sfsu.edu - Homepage

Evolution Molecular Biology Bioinformatics Intragenomic Conflict Atypical Genetic Systems


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Elephant shark genome provides unique insights into gnathostome evolution B Venkatesh, AP Lee, V Ravi, AK Maurya, MM Lian, JB Swann, Y Ohta, ... Nature 505 (7482), 174-179, 2014	754	2014
The evolution of spliceosomal introns: patterns, puzzles and progress S William Roy, W Gilbert Nature Reviews Genetics 7 (3), 211-221, 2006	673	2006
Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs BA Curtis, G Tanifuji, F Burki, A Gruber, M Irimia, S Maruyama, MC Arias, ... Nature 492 (7427), 59-65, 2012	434	2012
Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling M Clarke, AJ Lohan, B Liu, I Lagkouvardos, S Roy, N Zafar, C Bertelli, ... Genome biology 14, 1-15, 2013	333	2013
Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate F Denoeud, S Henriet, S Mungpakdee, JM Aury, C Da Silva, H Brinkmann, ... Science 330 (6009), 1381-1385, 2010	320	2010
Large-scale comparison of intron positions in mammalian genes shows intron loss but no gain SW Roy, A Fedorov, W Gilbert Proceedings of the National Academy of Sciences 100 (12), 7158-7162, 2003	244	2003
Rates of intron loss and gain: implications for early eukaryotic evolution SW Roy, W Gilbert Proceedings of the National Academy of Sciences 102 (16), 5773-5778, 2005	232	2005
Toward a resolution of the introns early/late debate: only phase zero introns are correlated with the structure of ancient proteins SJ De Souza, M Long, RJ Klein, S Roy, S Lin, W Gilbert Proceedings of the National Academy of Sciences 95 (9), 5094-5099, 1998	217	1998
Patterns of Intron Loss and Gain in Plants: Intron Loss–Dominated Evolution and Genome-Wide Comparison of O. sativa and A. thaliana SW Roy, D Penny Molecular biology and evolution 24 (1), 171-181, 2007	211	2007
Origin of spliceosomal introns and alternative splicing M Irimia, SW Roy Cold Spring Harbor perspectives in biology 6 (6), a016071, 2014	192	2014
Complex early genes SW Roy, W Gilbert Proceedings of the National Academy of Sciences 102 (6), 1986-1991, 2005	173	2005
Comparative genomic analysis of fungal genomes reveals intron-rich ancestors JE Stajich, FS Dietrich, SW Roy Genome biology 8, 1-13, 2007	154	2007
Extensive conservation of ancient microsynteny across metazoans due to cis-regulatory constraints M Irimia, JJ Tena, MS Alexis, A Fernandez-Miñan, I Maeso, O Bogdanović, ... Genome research 22 (12), 2356-2367, 2012	151	2012
Intron positions correlate with module boundaries in ancient proteins SJ De Souza, M Long, L Schoenbach, SW Roy, W Gilbert Proceedings of the National Academy of Sciences 93 (25), 14632-14636, 1996	151	1996
The pattern of intron loss SW Roy, W Gilbert Proceedings of the National Academy of Sciences 102 (3), 713-718, 2005	142	2005
Compensatory mutations restore fitness during the evolution of dihydrofolate reductase KM Brown, MS Costanzo, W Xu, S Roy, ER Lozovsky, DL Hartl Molecular biology and evolution 27 (12), 2682-2690, 2010	124	2010
Coevolution of genomic intron number and splice sites M Irimia, D Penny, SW Roy Trends in Genetics 23 (7), 321-325, 2007	120	2007
Spliceosomal introns as tools for genomic and evolutionary analysis M Irimia, SW Roy Nucleic acids research 36 (5), 1703-1712, 2008	118	2008
The macronuclear genome of Stentor coeruleus reveals tiny introns in a giant cell MM Slabodnick, JG Ruby, SB Reiff, EC Swart, S Gosai, S Prabakaran, ... Current Biology 27 (4), 569-575, 2017	114	2017
Functional and evolutionary analysis of alternatively spliced genes is consistent with an early eukaryotic origin of alternative splicing M Irimia, JL Rukov, D Penny, SW Roy BMC evolutionary biology 7, 1-12, 2007	106	2007

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