| rMATS: robust and flexible detection of differential alternative splicing from replicate RNA-Seq data S Shen, JW Park, Z Lu, L Lin, MD Henry, YN Wu, Q Zhou, Y Xing Proceedings of the national academy of sciences 111 (51), E5593-E5601, 2014 | 2316 | 2014 |
| Plant-derived exosomal microRNAs shape the gut microbiota Y Teng, YI Ren, M Sayed, X Hu, C Lei, A Kumar, E Hutchins, J Mu, Z Deng, ... Cell host & microbe 24 (5), 637-652. e8, 2018 | 752 | 2018 |
| MATS: a Bayesian framework for flexible detection of differential alternative splicing from RNA-Seq data S Shen, JW Park, J Huang, KA Dittmar, Z Lu, Q Zhou, RP Carstens, Y Xing Nucleic acids research 40 (8), e61-e61, 2012 | 384 | 2012 |
| BS69/ZMYND11 reads and connects histone H3. 3 lysine 36 trimethylation-decorated chromatin to regulated pre-mRNA processing R Guo, L Zheng, JW Park, R Lv, H Chen, F Jiao, W Xu, S Mu, H Wen, ... Molecular cell 56 (2), 298-310, 2014 | 235 | 2014 |
| Genetic engineering of a temperate phage-based delivery system for CRISPR/Cas9 antimicrobials against Staphylococcus aureus JY Park, BY Moon, JW Park, JA Thornton, YH Park, KS Seo Scientific reports 7 (1), 44929, 2017 | 205 | 2017 |
| High-fat diet-induced upregulation of exosomal phosphatidylcholine contributes to insulin resistance A Kumar, K Sundaram, J Mu, GW Dryden, MK Sriwastva, C Lei, L Zhang, ... Nature communications 12 (1), 213, 2021 | 190 | 2021 |
| Plant-derived exosomal microRNAs inhibit lung inflammation induced by exosomes SARS-CoV-2 Nsp12 Y Teng, F Xu, X Zhang, J Mu, M Sayed, X Hu, C Lei, M Sriwastva, ... Molecular Therapy 29 (8), 2424-2440, 2021 | 168 | 2021 |
| Genome-wide determination of a broad ESRP-regulated posttranscriptional network by high-throughput sequencing KA Dittmar, P Jiang, JW Park, K Amirikian, J Wan, S Shen, Y Xing, ... Molecular and cellular biology 32 (8), 1468-1482, 2012 | 154 | 2012 |
| The splicing regulators Esrp1 and Esrp2 direct an epithelial splicing program essential for mammalian development TW Bebee, JW Park, KI Sheridan, CC Warzecha, BW Cieply, AM Rohacek, ... Elife 4, e08954, 2015 | 151 | 2015 |
| Plant-derived exosomal nanoparticles inhibit pathogenicity of Porphyromonas gingivalis K Sundaram, DP Miller, A Kumar, Y Teng, M Sayed, J Mu, C Lei, ... Iscience 21, 308-327, 2019 | 141 | 2019 |
| Determination of a comprehensive alternative splicing regulatory network and combinatorial regulation by key factors during the epithelial-to-mesenchymal transition Y Yang, JW Park, TW Bebee, CC Warzecha, Y Guo, X Shang, Y Xing, ... Molecular and cellular biology 36 (11), 1704-1719, 2016 | 140 | 2016 |
| HDAC inhibition impedes epithelial–mesenchymal plasticity and suppresses metastatic, castration-resistant prostate cancer M Ruscetti, EL Dadashian, W Guo, B Quach, DJ Mulholland, JW Park, ... Oncogene 35 (29), 3781-3795, 2016 | 130 | 2016 |
| Transcriptome sequencing reveals aberrant alternative splicing in Huntington's disease L Lin, JW Park, S Ramachandran, Y Zhang, YT Tseng, S Shen, ... Human molecular genetics 25 (16), 3454-3466, 2016 | 127 | 2016 |
| Exosome‐like nanoparticles from Mulberry bark prevent DSS‐induced colitis via the AhR/COPS8 pathway MK Sriwastva, ZB Deng, B Wang, Y Teng, A Kumar, K Sundaram, J Mu, ... EMBO reports 23 (3), e53365, 2022 | 102 | 2022 |
| GLiMMPS: robust statistical model for regulatory variation of alternative splicing using RNA-seq data K Zhao, Z Lu, JW Park, Q Zhou, Y Xing Genome biology 14, 1-15, 2013 | 86 | 2013 |
| Identifying differential alternative splicing events from RNA sequencing data using RNASeq-MATS JW Park, C Tokheim, S Shen, Y Xing Deep sequencing data analysis, 171-179, 2013 | 86 | 2013 |
| Garlic exosome-like nanoparticles reverse high-fat diet induced obesity via the gut/brain axis K Sundaram, J Mu, A Kumar, J Behera, C Lei, MK Sriwastva, F Xu, ... Theranostics 12 (3), 1220, 2022 | 84 | 2022 |
| rMAPS: RNA map analysis and plotting server for alternative exon regulation JW Park, S Jung, EC Rouchka, YT Tseng, Y Xing Nucleic acids research 44 (W1), W333-W338, 2016 | 81 | 2016 |
| Multiphasic and dynamic changes in alternative splicing during induction of pluripotency are coordinated by numerous RNA-binding proteins B Cieply, JW Park, A Nakauka-Ddamba, TW Bebee, Y Guo, X Shang, ... Cell reports 15 (2), 247-255, 2016 | 81 | 2016 |
| Transcriptome-wide landscape of pre-mRNA alternative splicing associated with metastatic colonization Z Lu, Q Huang, JW Park, S Shen, L Lin, CJ Tokheim, MD Henry, Y Xing Molecular Cancer Research 13 (2), 305-318, 2015 | 79 | 2015 |
Yi XingProfessor, Children's Hospital of Philadelphia & University of PennsylvaniaVerified email at ucla.edu