CHARMM‐GUI 10 years for biomolecular modeling and simulation S Jo, X Cheng, J Lee, S Kim, SJ Park, DS Patel, AH Beaven, KI Lee, H Rui, ... Journal of computational chemistry 38 (15), 1114-1124, 2017 | 299 | 2017 |
Bilayer properties of lipid A from various Gram-negative bacteria S Kim, DS Patel, S Park, J Slusky, JB Klauda, G Widmalm, W Im Biophysical journal 111 (8), 1750-1760, 2016 | 122 | 2016 |
CHARMM-GUI polymer builder for modeling and simulation of synthetic polymers YK Choi, SJ Park, S Park, S Kim, NR Kern, J Lee, W Im Journal of chemical theory and computation 17 (4), 2431-2443, 2021 | 102 | 2021 |
CHARMM-GUI HMMM builder for membrane simulations with the highly mobile membrane-mimetic model Y Qi, X Cheng, J Lee, JV Vermaas, TV Pogorelov, E Tajkhorshid, S Park, ... Biophysical journal 109 (10), 2012-2022, 2015 | 102 | 2015 |
Distance-dependent proton transfer along water wires connecting acid− base pairs MJ Cox, RLA Timmer, HJ Bakker, S Park, N Agmon The Journal of Physical Chemistry A 113 (24), 6599-6606, 2009 | 85 | 2009 |
How Tolerant are Membrane Simulations with Mismatch in Area per Lipid between Leaflets? S Park, AH Beaven, JB Klauda, W Im Journal of Chemical Theory and Computation 11 (7), 3466–3477, 2015 | 82 | 2015 |
Transmembrane helix assembly by window exchange umbrella sampling S Park, T Kim, W Im Physical Review Letters 108 (10), 108102, 2012 | 79 | 2012 |
Influence of ganglioside GM1 concentration on lipid clustering and membrane properties and curvature DS Patel, S Park, EL Wu, MS Yeom, G Widmalm, JB Klauda, W Im Biophysical journal 111 (9), 1987-1999, 2016 | 62 | 2016 |
CHARMM-GUI membrane builder for lipid nanoparticles with ionizable cationic lipids and PEGylated lipids S Park, YK Choi, S Kim, J Lee, W Im Journal of chemical information and modeling 61 (10), 5192-5202, 2021 | 54 | 2021 |
Theory and simulation of diffusion-controlled Michaelis− Menten kinetics for a static enzyme in solution S Park, N Agmon The Journal of Physical Chemistry B 112 (19), 5977-5987, 2008 | 51 | 2008 |
Two Dimensional Window Exchange Umbrella Sampling for Transmembrane Helix Assembly S Park, W Im Journal of Chemical Theory and Computation 9 (1), 13-17, 2013 | 50 | 2013 |
Comparative molecular dynamics simulation studies of realistic eukaryotic, prokaryotic, and archaeal membranes ID Pogozheva, GA Armstrong, L Kong, TJ Hartnagel, CA Carpino, SE Gee, ... Journal of chemical information and modeling 62 (4), 1036-1051, 2022 | 49 | 2022 |
Transmembrane features governing Fc receptor CD16A assembly with CD16A signaling adaptor molecules A Blázquez-Moreno, S Park, W Im, MJ Call, ME Call, HT Reyburn Proceedings of the National Academy of Sciences 114 (28), E5645-E5654, 2017 | 48 | 2017 |
A conserved αβ transmembrane interface forms the core of a compact T-cell receptor–CD3 structure within the membrane L Krshnan, S Park, W Im, MJ Call, ME Call Proceedings of the National Academy of Sciences 113 (43), E6649-E6658, 2016 | 47 | 2016 |
CHARMM-GUI Membrane Builder: Past, Current, and Future Developments and Applications S Feng, S Park, YK Choi, W Im Journal of chemical theory and computation 19 (8), 2161-2185, 2023 | 33 | 2023 |
Developing initial conditions for simulations of asymmetric membranes: a practical recommendation S Park, W Im, RW Pastor Biophysical journal 120 (22), 5041-5059, 2021 | 30 | 2021 |
Lipid-linked oligosaccharides in membranes sample conformations that facilitate binding to oligosaccharyltransferase NR Kern, HS Lee, EL Wu, S Park, K Vanommeslaeghe, AD MacKerell, ... Biophysical journal 107 (8), 1885-1895, 2014 | 29 | 2014 |
Atomistic simulations of dilute polyelectrolyte solutions S Park, X Zhu, A Yethiraj The Journal of Physical Chemistry B 116 (14), 4319-4327, 2012 | 29 | 2012 |
Theory of Adaptive Optimization for Umbrella Sampling S Park, W Im Journal of Chemical Theory and Computation 10 (7), 2719-2728, 2014 | 28 | 2014 |
Transmembrane Complexes of DAP12 Crystallized in Lipid Membranes Provide Insights into Control of Oligomerization in Immunoreceptor Assembly K Knoblich, S Park, M Lutfi, L van’t Hag, CE Conn, SA Seabrook, ... Cell Reports 11 (8), 1184-1192, 2015 | 27 | 2015 |