Articles with public access mandates - Felix NaefLearn more
Not available anywhere: 5
Cold-inducible RNA-binding protein modulates circadian gene expression posttranscriptionally
J Morf, G Rey, K Schneider, M Stratmann, J Fujita, F Naef, U Schibler
Science 338 (6105), 379-383, 2012
Mandates: Swiss National Science Foundation, US National Institutes of Health, Swedish …
A self-regulatory system of interlinked signaling feedback loops controls mouse limb patterning
JD Bénazet, M Bischofberger, E Tiecke, A Gonçalves, JF Martin, A Zuniga, ...
Science 323 (5917), 1050-1053, 2009
Mandates: Swiss National Science Foundation, US National Institutes of Health
What shapes eukaryotic transcriptional bursting?
D Nicolas, NE Phillips, F Naef
Molecular BioSystems 13 (7), 1280-1290, 2017
Mandates: Swiss National Science Foundation
Rhythms of the genome: circadian dynamics from chromatin topology, tissue-specific gene expression, to behavior
J Yeung, F Naef
Trends in Genetics 34 (12), 915-926, 2018
Mandates: Swiss National Science Foundation, Natural Sciences and Engineering Research …
Computational analysis of protein–DNA interactions from ChIP-seq data
J Rougemont, F Naef
Gene Regulatory Networks: Methods and Protocols, 263-273, 2012
Mandates: Swiss National Science Foundation
Available somewhere: 68
Mammalian genes are transcribed with widely different bursting kinetics
DM Suter, N Molina, D Gatfield, K Schneider, U Schibler, F Naef
science 332 (6028), 472-474, 2011
Mandates: Swiss National Science Foundation
Genome-wide and phase-specific DNA-binding rhythms of BMAL1 control circadian output functions in mouse liver
G Rey, F Cesbron, J Rougemont, H Reinke, M Brunner, F Naef
PLoS biology 9 (2), e1000595, 2011
Mandates: Swiss National Science Foundation
Circadian clock-dependent and-independent rhythmic proteomes implement distinct diurnal functions in mouse liver
D Mauvoisin, J Wang, C Jouffe, E Martin, F Atger, P Waridel, M Quadroni, ...
Proceedings of the National Academy of Sciences 111 (1), 167-172, 2014
Mandates: Swiss National Science Foundation, European Commission
The circadian clock coordinates ribosome biogenesis
C Jouffe, G Cretenet, L Symul, E Martin, F Atger, F Naef, F Gachon
PLoS biology 11 (1), e1001455, 2013
Mandates: Swiss National Science Foundation, National Institute of Health and Medical …
Guidelines for genome-scale analysis of biological rhythms
ME Hughes, KC Abruzzi, R Allada, R Anafi, AB Arpat, G Asher, P Baldi, ...
Journal of biological rhythms 32 (5), 380-393, 2017
Mandates: US National Science Foundation, US Department of Defense, US National …
The mouse microbiome is required for sex-specific diurnal rhythms of gene expression and metabolism
BD Weger, C Gobet, J Yeung, E Martin, S Jimenez, B Betrisey, F Foata, ...
Cell metabolism 29 (2), 362-382. e8, 2019
Mandates: Swiss National Science Foundation, Natural Sciences and Engineering Research …
Circadian and feeding rhythms differentially affect rhythmic mRNA transcription and translation in mouse liver
F Atger, C Gobet, J Marquis, E Martin, J Wang, B Weger, G Lefebvre, ...
Proceedings of the National Academy of Sciences 112 (47), E6579-E6588, 2015
Mandates: Swiss National Science Foundation, European Commission
Robust synchronization of coupled circadian and cell cycle oscillators in single mammalian cells
J Bieler, R Cannavo, K Gustafson, C Gobet, D Gatfield, F Naef
Molecular systems biology 10 (7), 739, 2014
Mandates: Swiss National Science Foundation, European Commission
Genome-wide RNA polymerase II profiles and RNA accumulation reveal kinetics of transcription and associated epigenetic changes during diurnal cycles
G Le Martelot, D Canella, L Symul, E Migliavacca, F Gilardi, R Liechti, ...
PLoS biology 10 (11), e1001442, 2012
Mandates: Swiss National Science Foundation
Nuclear proteomics uncovers diurnal regulatory landscapes in mouse liver
J Wang, D Mauvoisin, E Martin, F Atger, AN Galindo, L Dayon, F Sizzano, ...
Cell metabolism 25 (1), 102-117, 2017
Mandates: Swiss National Science Foundation, European Commission
Circadian gene expression is resilient to large fluctuations in overall transcription rates
C Dibner, D Sage, M Unser, C Bauer, T d'Eysmond, F Naef, U Schibler
The EMBO journal 28 (2), 123-134, 2009
Mandates: Swiss National Science Foundation
Stimulus-induced modulation of transcriptional bursting in a single mammalian gene
N Molina, DM Suter, R Cannavo, B Zoller, I Gotic, F Naef
Proceedings of the National Academy of Sciences 110 (51), 20563-20568, 2013
Mandates: Swiss National Science Foundation, European Commission
Modulation of transcriptional burst frequency by histone acetylation
D Nicolas, B Zoller, DM Suter, F Naef
Proceedings of the National Academy of Sciences 115 (27), 7153-7158, 2018
Mandates: Swiss National Science Foundation
Engineered signaling centers for the spatially controlled patterning of human pluripotent stem cells
A Manfrin, Y Tabata, ER Paquet, AR Vuaridel, FR Rivest, F Naef, ...
Nature methods 16 (7), 640-648, 2019
Mandates: Swiss National Science Foundation, US National Institutes of Health …
Probabilistic base calling of Solexa sequencing data
J Rougemont, A Amzallag, C Iseli, L Farinelli, I Xenarios, F Naef
BMC bioinformatics 9, 1-12, 2008
Mandates: Swiss National Science Foundation
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