Márcio Dorn

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Mario Inostroza PontaAssociate Professor, Universidad de Santiago de ChileVerified email at usach.cl
Mathias J KrauseKIT, OpenLBVerified email at kit.edu
Bruno BorguesanPhD Student, Institute of Informatics, Federal University of Rio Grande do Sul - UFRGSVerified email at inf.ufrgs.br
Leonardo de Lima CorrêaPhD student in Computer Science, Federal University of Rio Grande do SulVerified email at inf.ufrgs.br
Hugo VerliProfessor de Bioinformática, Centro de Biotecnologia, Universidade Federal do Rio Grande do SulVerified email at cbiot.ufrgs.br
Pedro Henrique NarlochFederal University of Rio Grande do SulVerified email at inf.ufrgs.br
Rodrigo Ligabue-BraunAssociate Professor, Dept Pharmacosciences, UFCSPAVerified email at ufcspa.edu.br
CLARICE SAMPAIO ALHOProfessora Titular Pontifícia Universidade Católica do Rio Grande do SulVerified email at pucrs.br
Manuel Villalobos-CidDepartamento de Ingeniería Informática, Universidad de Santiago de ChileVerified email at usach.cl
Jorge Parraga-AlavaUniversidad Técnica de ManabíVerified email at utm.edu.ec
Gudrun ThaeterAkademische Oberrätin, Fakultät für Mathematik, KITVerified email at kit.edu
Pablo Felipe LeonhartMestrando em Computação, Universidade Federal do Rio Grande do Sul (UFRGS)Verified email at inf.ufrgs.br
Itamar José Guimarães NunesResearch Student, University of TokyoVerified email at g.ecc.u-tokyo.ac.jp
Carlos Humberto LlanosEng. Mecânica, Universidade de BrasíliaVerified email at unb.br
Roberto LinsOswaldo Cruz FoundationVerified email at cpqam.fiocruz.br
Mauricio MarinUniversity of Santiago, ChileVerified email at usach.cl
Nicolas HidalgoAssociate Professor, Universidad Diego PortalesVerified email at mail.udp.cl
Conrado PedebosPostdoctoral Research Associate - Universidade Federal de Ciências da Saúde de Porto AlegreVerified email at ufcspa.edu.br
Ivani PauliPhD student, University of São Paulo, USPVerified email at usp.br
Ardala Katzfuss (née Breda)University of Wisconsin - MadisonVerified email at wisc.edu

Márcio Dorn

Federal University of Rio Grande do Sul

Verified email at inf.ufrgs.br - Homepage

Bioinformatics Metaheuristics Structural Bioinformatics Machine Learning Optimization


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Three-dimensional protein structure prediction: Methods and computational strategies M Dorn, MB e Silva, LS Buriol, LC Lamb Computational biology and chemistry 53, 251-276, 2014	259	2014
Cumida: An extensively curated microarray database for benchmarking and testing of machine learning approaches in cancer research BC Feltes, EB Chandelier, BI Grisci, M Dorn Journal of Computational Biology 26 (4), 376-386, 2019	124	2019
Aromatic rings commonly used in medicinal chemistry: force fields comparison and interactions with water toward the design of new chemical entities MD Polêto, VH Rusu, BI Grisci, M Dorn, RD Lins, H Verli Frontiers in pharmacology 9, 395, 2018	69	2018
APL: An angle probability list to improve knowledge-based metaheuristics for the three-dimensional protein structure prediction B Borguesan, MB e Silva, B Grisci, M Inostroza-Ponta, M Dorn Computational biology and chemistry 59, 142-157, 2015	53	2015
Hemogram data as a tool for decision-making in COVID-19 management: applications to resource scarcity scenarios E Avila, A Kahmann, C Alho, M Dorn PeerJ 8, e9482, 2020	46	2020
Neuroevolution as a tool for microarray gene expression pattern identification in cancer research BI Grisci, BC Feltes, M Dorn Journal of biomedical informatics 89, 122-133, 2019	43	2019
A GMDH polynomial neural network-based method to predict approximate three-dimensional structures of polypeptides M Dorn, ALS Braga, CH Llanos, LS Coelho Expert Systems with Applications 39 (15), 12268-12279, 2012	40	2012
The tale of a versatile enzyme: Alpha-amylase evolution, structure, and potential biotechnological applications for the bioremediation of n-alkanes ÉSM Pinto, M Dorn, BC Feltes Chemosphere 250, 126202, 2020	35	2020
A memetic algorithm for 3D protein structure prediction problem L Correa, B Borguesan, C Farfán, M Inostroza-Ponta, M Dorn IEEE/ACM transactions on computational biology and bioinformatics 15 (3 …, 2016	34	2016
Relevance aggregation for neural networks interpretability and knowledge discovery on tabular data BI Grisci, MJ Krause, M Dorn Information sciences 559, 111-129, 2021	32	2021
Analysis and comparison of feature selection methods towards performance and stability MC Barbieri, BI Grisci, M Dorn Expert Systems with Applications, 123667, 2024	30	2024
A memetic algorithm based on an NSGA-II scheme for phylogenetic tree inference M Villalobos-Cid, M Dorn, R Ligabue-Braun, M Inostroza-Ponta IEEE transactions on evolutionary computation 23 (5), 776-787, 2018	29	2018
A multi-objective gene clustering algorithm guided by apriori biological knowledge with intensification and diversification strategies J Parraga-Alava, M Dorn, M Inostroza-Ponta BioData mining 11, 1-22, 2018	28	2018
Multi-approach bioinformatics analysis of curated omics data provides a gene expression panorama for multiple cancer types BC Feltes, JF Poloni, IJG Nunes, SS Faria, M Dorn Frontiers in genetics 11, 586602, 2020	27	2020
A hybrid genetic algorithm for the 3-d protein structure prediction problem using a path-relinking strategy M Dorn, LS Buriol, LC Lamb 2011 IEEE Congress of Evolutionary Computation (CEC), 2709-2716, 2011	26	2011
Nias-server: Neighbors influence of amino acids and secondary structures in proteins B Borguesan, M Inostroza-Ponta, M Dorn Journal of Computational Biology 24 (3), 255-265, 2017	25	2017
Three-dimensional protein structure prediction based on memetic algorithms L de Lima Corrêa, B Borguesan, MJ Krause, M Dorn Computers & Operations Research 91, 160-177, 2018	24	2018
Evaluation of drug repositioning by molecular docking of pharmaceutical resources available in the Brazilian healthcare system against SARS-CoV-2 MVC Grahl, AM Alcará, APA Perin, CF Moro, ÉSM Pinto, BC Feltes, ... Informatics in medicine unlocked 23, 100539, 2021	23	2021
CReF: A central-residue-fragment-based method for predicting approximate 3-D polypeptides structures M Dorn, ON de Souza Proceedings of the 2008 ACM symposium on Applied computing, 1261-1267, 2008	22	2008
Implicit propagation of directly addressed grids in lattice Boltzmann methods A Kummerländer, M Dorn, M Frank, MJ Krause Concurrency and Computation: Practice and Experience 35 (8), e7509, 2023	21	2023

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