Articles with public access mandates - Xiaofei Yang - 杨晓飞Learn more
Not available anywhere: 2
Discovering DNA methylation patterns for long non-coding RNAs associated with cancer subtypes
X Ma, L Yu, P Wang, X Yang
Computational biology and chemistry 69, 164-170, 2017
Mandates: National Natural Science Foundation of China
Platelet distribution width: A significant predictor of poor outcome after mechanical thrombectomy
Y Li, T Li, L Zhao, Y Zhang, X Wang, Y Wu, Z Lu, J Lu, M Dang, H Wang, ...
Journal of Stroke and Cerebrovascular Diseases 31 (3), 106273, 2022
Mandates: National Natural Science Foundation of China
Available somewhere: 32
Haplotype-resolved diverse human genomes and integrated analysis of structural variation
P Ebert, PA Audano, Q Zhu, B Rodriguez-Martin, D Porubsky, MJ Bonder, ...
Science 372 (6537), eabf7117, 2021
Mandates: US National Institutes of Health, National Natural Science Foundation of …
The opium poppy genome and morphinan production
L Guo, T Winzer, X Yang, Y Li, Z Ning, Z He, R Teodor, Y Lu, TA Bowser, ...
Science 362 (6412), 343-347, 2018
Mandates: National Natural Science Foundation of China, UK Biotechnology and …
Comparative pan-cancer DNA methylation analysis reveals cancer common and specific patterns
X Yang, L Gao, S Zhang
Briefings in bioinformatics 18 (5), 761-773, 2017
Mandates: Chinese Academy of Sciences, National Natural Science Foundation of China
High-Quality Arabidopsis Thaliana Genome Assembly with Nanopore and HiFi Long Reads
B Wang, X Yang, Y Jia, Y Xu, P Jia, N Dang, S Wang, T Xu, X Zhao, S Gao, ...
Genomics, Proteomics and Bioinformatics 20 (1), 4-13, 2022
Mandates: National Natural Science Foundation of China
One reference genome is not enough
X Yang, WP Lee, K Ye, C Lee
Genome biology 20, 1-3, 2019
Mandates: US National Institutes of Health, National Natural Science Foundation of China
A pangenome reference of 36 Chinese populations
Y Gao, X Yang, H Chen, X Tan, Z Yang, L Deng, B Wang, S Kong, S Li, ...
Nature 619 (7968), 112-121, 2023
Mandates: Chinese Academy of Sciences, National Natural Science Foundation of China …
MSIsensor-pro: fast, accurate, and matched-normal-sample-free detection of microsatellite instability
P Jia, X Yang, L Guo, B Liu, J Lin, H Liang, J Sun, C Zhang, K Ye
Genomics, Proteomics and Bioinformatics 18 (1), 65-71, 2020
Mandates: National Natural Science Foundation of China
Three chromosome-scale Papaver genomes reveal punctuated patchwork evolution of the morphinan and noscapine biosynthesis pathway
X Yang, S Gao, L Guo, B Wang, Y Jia, J Zhou, Y Che, P Jia, J Lin, T Xu, ...
Nature communications 12 (1), 6030, 2021
Mandates: National Natural Science Foundation of China
Systematic DNA methylation analysis of multiple cell lines reveals common and specific patterns within and across tissues of origin
X Yang, X Shao, L Gao, S Zhang
Human molecular genetics 24 (15), 4374-4384, 2015
Mandates: National Natural Science Foundation of China
SVision: a deep learning approach to resolve complex structural variants
J Lin, S Wang, PA Audano, D Meng, JI Flores, W Kosters, X Yang, P Jia, ...
Nature Methods 19 (10), 1230-1233, 2022
Mandates: US National Institutes of Health, National Natural Science Foundation of China
Cellular heterogeneity and transcriptomic profiles during intrahepatic cholangiocarcinoma initiation and progression
T Wang, C Xu, Z Zhang, H Wu, X Li, Y Zhang, N Deng, N Dang, G Tang, ...
Hepatology 76 (5), 1302-1317, 2022
Mandates: National Natural Science Foundation of China
Integrating bulk and single‐cell RNA sequencing reveals cellular heterogeneity and immune infiltration in hepatocellular carcinoma
T Wang, N Dang, G Tang, Z Li, X Li, B Shi, Z Xu, L Li, X Yang, C Xu, K Ye
Molecular Oncology 16 (11), 2195-2213, 2022
Mandates: National Natural Science Foundation of China
Split-Read Indel and Structural Variant Calling Using PINDEL
K Ye, L Guo, X Yang, EW Lamijer, K Raine, Z Ning
Copy Number Variants: Methods and Protocols, 95-105, 2018
Mandates: National Natural Science Foundation of China
Identifying Overlapping Mutated Driver Pathways by Constructing Gene Networks in Cancer
H Wu, L Gao, F Li, F Song, X Yang, N Kasabov
BMC Bioinformatics 16 (Suppl 5), 2015
Mandates: National Natural Science Foundation of China
Comparative DNA methylation analysis to decipher common and cell type-specific patterns among multiple cell types
X Yang, X Shao, L Gao, S Zhang
Briefings in functional genomics 15 (6), 399-407, 2016
Mandates: National Natural Science Foundation of China
HiCAT: a tool for automatic annotation of centromere structure
S Gao, X Yang, H Guo, X Zhao, B Wang, K Ye
Genome Biology 24 (1), 58, 2023
Mandates: National Natural Science Foundation of China
Haplotype-resolved chinese male genome assembly based on high-fidelity sequencing
X Yang, X Zhao, S Qu, P Jia, B Wang, S Gao, T Xu, W Zhang, J Huang, ...
Fundamental Research 2 (6), 946-953, 2022
Mandates: National Natural Science Foundation of China
Detection of acute ischemic stroke and backtracking stroke onset time via machine learning analysis of metabolomics
Y Zhang, D Zhu, T Li, X Wang, L Zhao, X Yang, M Dang, Y Li, Y Wu, Z Lu, ...
Biomedicine & Pharmacotherapy 155, 113641, 2022
Mandates: National Natural Science Foundation of China
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