| The phage‐host arms race: shaping the evolution of microbes A Stern, R Sorek Bioessays 33 (1), 43-51, 2011 | 644 | 2011 |
| Self-targeting by CRISPR: gene regulation or autoimmunity? A Stern, L Keren, O Wurtzel, G Amitai, R Sorek Trends in genetics 26 (8), 335-340, 2010 | 486 | 2010 |
| Evidence for increased breakthrough rates of SARS-CoV-2 variants of concern in BNT162b2-mRNA-vaccinated individuals T Kustin, N Harel, U Finkel, S Perchik, S Harari, M Tahor, I Caspi, R Levy, ... Nature medicine 27 (8), 1379-1384, 2021 | 407 | 2021 |
| Selecton 2007: advanced models for detecting positive and purifying selection using a Bayesian inference approach A Stern, A Doron-Faigenboim, E Erez, E Martz, E Bacharach, T Pupko Nucleic acids research 35 (suppl_2), W506-W511, 2007 | 362 | 2007 |
| CRISPR targeting reveals a reservoir of common phages associated with the human gut microbiome A Stern, E Mick, I Tirosh, O Sagy, R Sorek Genome research 22 (10), 1985-1994, 2012 | 270 | 2012 |
| Full genome viral sequences inform patterns of SARS-CoV-2 spread into and within Israel D Miller, MA Martin, N Harel, O Tirosh, T Kustin, M Meir, N Sorek, ... Nature communications 11 (1), 5518, 2020 | 189 | 2020 |
| Selecton: a server for detecting evolutionary forces at a single amino-acid site A Doron-Faigenboim, A Stern, I Mayrose, E Bacharach, T Pupko Bioinformatics 21 (9), 2101-2103, 2005 | 169 | 2005 |
| The evolutionary pathway to virulence of an RNA virus A Stern, M Te Yeh, T Zinger, M Smith, C Wright, G Ling, R Nielsen, ... Cell 169 (1), 35-46. e19, 2017 | 136 | 2017 |
| Drivers of adaptive evolution during chronic SARS-CoV-2 infections S Harari, M Tahor, N Rutsinsky, S Meijer, D Miller, O Henig, O Halutz, ... Nature medicine 28 (7), 1501-1508, 2022 | 110 | 2022 |
| Costs and benefits of mutational robustness in RNA viruses A Stern, S Bianco, M Te Yeh, C Wright, K Butcher, C Tang, R Nielsen, ... Cell reports 8 (4), 1026-1036, 2014 | 63 | 2014 |
| Biased mutation and selection in RNA viruses T Kustin, A Stern Molecular Biology and Evolution 38 (2), 575-588, 2021 | 55 | 2021 |
| A likelihood framework to analyse phyletic patterns O Cohen, ND Rubinstein, A Stern, U Gophna, T Pupko Philosophical Transactions of the Royal Society B: Biological Sciences 363 …, 2008 | 55 | 2008 |
| Evolution of the metazoan protein phosphatase 2C superfamily A Stern, E Privman, M Rasis, S Lavi, T Pupko Journal of molecular evolution 64, 61-70, 2007 | 51 | 2007 |
| In vivo engineered B cells secrete high titers of broadly neutralizing anti-HIV antibodies in mice AD Nahmad, CR Lazzarotto, N Zelikson, T Kustin, M Tenuta, D Huang, ... Nature biotechnology 40 (8), 1241-1249, 2022 | 49 | 2022 |
| A method to identify respiratory virus infections in clinical samples using next-generation sequencing T Kustin, G Ling, S Sharabi, D Ram, N Friedman, N Zuckerman, ED Bucris, ... Scientific reports 9 (1), 2606, 2019 | 44 | 2019 |
| Assessing the prediction fidelity of ancestral reconstruction by a library approach H Bar-Rogovsky, A Stern, O Penn, I Kobl, T Pupko, DS Tawfik Protein Engineering, Design and Selection 28 (11), 507-518, 2015 | 44 | 2015 |
| Viral evolution: it is all about mutations A Stern, R Andino Viral pathogenesis, 233-240, 2016 | 42 | 2016 |
| An evolutionary analysis of lateral gene transfer in thymidylate synthase enzymes A Stern, I Mayrose, O Penn, S Shaul, U Gophna, T Pupko Systematic biology 59 (2), 212-225, 2010 | 41 | 2010 |
| Evolutionary modeling of rate shifts reveals specificity determinants in HIV-1 subtypes O Penn, A Stern, ND Rubinstein, J Dutheil, E Bacharach, N Galtier, ... PLoS computational biology 4 (11), e1000214, 2008 | 41 | 2008 |
| Direct sequencing of RNA with MinION Nanopore: detecting mutations based on associations N Harel, M Meir, U Gophna, A Stern Nucleic Acids Research 47 (22), e148-e148, 2019 | 38 | 2019 |
Tal PupkoProfessor of Life Sciences, Tel-Aviv UniversityVerified email at tauex.tau.ac.il