Articles with public access mandates - Alex WashburneLearn more
Available somewhere: 30
Estimated transmissibility and impact of SARS-CoV-2 lineage B. 1.1. 7 in England
NG Davies, S Abbott, RC Barnard, CI Jarvis, AJ Kucharski, JD Munday, ...
Science 372 (6538), eabg3055, 2021
Mandates: Bill & Melinda Gates Foundation, UK Economic and Social Research Council, UK …
SARS-CoV-2 titers in wastewater are higher than expected from clinically confirmed cases
F Wu, J Zhang, A Xiao, X Gu, WL Lee, F Armas, K Kauffman, W Hanage, ...
Msystems 5 (4), 10.1128/msystems. 00614-20, 2020
Mandates: US National Institutes of Health
Establishing microbial composition measurement standards with reference frames
JT Morton, C Marotz, A Washburne, J Silverman, LS Zaramela, A Edlund, ...
Nature communications 10 (1), 2719, 2019
Mandates: US National Science Foundation, US National Institutes of Health
Estimated transmissibility and severity of novel SARS-CoV-2 Variant of Concern 202012/01 in England
NG Davies, S Abbott, RC Barnard, CI Jarvis, AJ Kucharski, J Munday, ...
MedRxiv, 2020.12. 24.20248822, 2020
Mandates: Bill & Melinda Gates Foundation, Department of International Development, UK …
A phylogenetic transform enhances analysis of compositional microbiota data
JD Silverman, AD Washburne, S Mukherjee, LA David
Elife 6, e21887, 2017
Mandates: US National Science Foundation, US National Institutes of Health
The microbiome stress project: toward a global meta-analysis of environmental stressors and their effects on microbial communities
JD Rocca, M Simonin, JR Blaszczak, JG Ernakovich, SM Gibbons, ...
Frontiers in microbiology 9, 3272, 2019
Mandates: US National Science Foundation
Using influenza surveillance networks to estimate state-specific prevalence of SARS-CoV-2 in the United States
JD Silverman, N Hupert, AD Washburne
Science translational medicine 12 (554), eabc1126, 2020
Mandates: US National Institutes of Health
Phylogenetic factorization of compositional data yields lineage-level associations in microbiome datasets
AD Washburne, JD Silverman, JW Leff, DJ Bennett, JL Darcy, ...
PeerJ 5, e2969, 2017
Mandates: US National Institutes of Health
Prioritizing surveillance of Nipah virus in India
RK Plowright, DJ Becker, DE Crowley, AD Washburne, T Huang, ...
PLoS neglected tropical diseases 13 (6), e0007393, 2019
Mandates: US National Science Foundation, US Department of Defense, US National …
Signatures of ecological processes in microbial community time series
K Faust, F Bauchinger, B Laroche, S De Buyl, L Lahti, AD Washburne, ...
Microbiome 6, 1-13, 2018
Mandates: Austrian Science Fund, Academy of Finland, UK Engineering and Physical …
Methods for phylogenetic analysis of microbiome data
AD Washburne, JT Morton, J Sanders, D McDonald, Q Zhu, AM Oliverio, ...
Nature microbiology 3 (6), 652-661, 2018
Mandates: US Department of Defense
Rare microbial taxa emerge when communities collide: freshwater and marine microbiome responses to experimental mixing
JD Rocca, M Simonin, ES Bernhardt, AD Washburne, JP Wright
Ecology 101 (3), e02956, 2020
Mandates: US National Science Foundation
Fitness tradeoffs between spores and nonaggregating cells can explain the coexistence of diverse genotypes in cellular slime molds
CE Tarnita, A Washburne, R Martinez-Garcia, AE Sgro, SA Levin
Proceedings of the National Academy of Sciences 112 (9), 2776-2781, 2015
Mandates: US National Institutes of Health
The ecology and diversity of microbial eukaryotes in geothermal springs
AM Oliverio, JF Power, A Washburne, SC Cary, MB Stott, N Fierer
The ISME journal 12 (8), 1918-1928, 2018
Mandates: US National Science Foundation
Dynamic and integrative approaches to understanding pathogen spillover
DJ Becker, AD Washburne, CL Faust, JRC Pulliam, EA Mordecai, ...
Philosophical Transactions of the Royal Society B 374 (1782), 20190014, 2019
Mandates: US National Science Foundation, US Department of Energy, US Department of …
Phylofactorization: a graph partitioning algorithm to identify phylogenetic scales of ecological data
AD Washburne, JD Silverman, JT Morton, DJ Becker, D Crowley, ...
Ecological Monographs 89 (2), e01353, 2019
Mandates: US Department of Defense
Guiding longitudinal sampling in IBD cohorts
Y Vázquez-Baeza, A Gonzalez, ZZ Xu, A Washburne, HH Herfarth, ...
Gut 67 (9), 1743-1745, 2018
Mandates: US National Institutes of Health
The problem of scale in the prediction and management of pathogen spillover
DJ Becker, AD Washburne, CL Faust, EA Mordecai, RK Plowright
Philosophical Transactions of the Royal Society B 374 (1782), 20190224, 2019
Mandates: US National Science Foundation, US Department of Energy, US Department of …
Temporal and spatial limitations in global surveillance for bat filoviruses and henipaviruses
DJ Becker, DE Crowley, AD Washburne, RK Plowright
Biology Letters 15 (12), 20190423, 2019
Mandates: US National Science Foundation, US Department of Defense, US Department of …
Ecological and evolutionary drivers of haemoplasma infection and bacterial genotype sharing in a Neotropical bat community
DJ Becker, KA Speer, AM Brown, MB Fenton, AD Washburne, S Altizer, ...
Molecular ecology 29 (8), 1534-1549, 2020
Mandates: US National Science Foundation, US Department of Defense, US National …
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