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Mert Gür
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Interplay between arginine methylation and ubiquitylation regulates KLF4-mediated genome stability and carcinogenesis
D Hu, M Gur, Z Zhou, A Gamper, MC Hung, N Fujita, L Lan, I Bahar, ...
Nature communications 6 (1), 8419, 2015
1492015
Conformational transition of SARS-CoV-2 spike glycoprotein between its closed and open states
M Gur, E Taka, SZ Yilmaz, C Kilinc, U Aktas, M Golcuk
The Journal of Chemical Physics 153, 075101, 2020
1332020
Exploring the conformational transitions of biomolecular systems using a simple two-state anisotropic network model
A Das, M Gur, MH Cheng, S Jo, I Bahar, B Roux
PLoS computational biology 10 (4), e1003521, 2014
1302014
Pre‐existing soft modes of motion uniquely defined by native contact topology facilitate ligand binding to proteins
L Meireles, M Gur, A Bakan, I Bahar
Protein Science 20 (10), 1645-1658, 2011
1062011
Global transitions of proteins explored by a multiscale hybrid methodology: application to adenylate kinase
M Gur, JD Madura, I Bahar
Biophysical journal 105 (7), 1643-1652, 2013
872013
Global motions exhibited by proteins in micro-to milliseconds simulations concur with anisotropic network model predictions
M Gur, E Zomot, I Bahar
The Journal of chemical physics 139 (12), 2013
872013
Structural and functional insight into regulation of kinesin-1 by microtubule-associated protein MAP7
LS Ferro, Q Fang, L Eshun-Wilson, J Fernandes, A Jack, DP Farrell, ...
Science 375 (6578), 326-331, 2022
812022
Directionality of dynein is controlled by the angle and length of its stalk
S Can, S Lacey, M Gur, AP Carter, A Yildiz
Nature 566 (7744), 407-410, 2019
682019
Critical interactions between the SARS-CoV-2 spike glycoprotein and the human ACE2 receptor
E Taka, SZ Yilmaz, M Golcuk, C Kilinc, U Aktas, A Yildiz, M Gur
The Journal of Physical Chemistry B 125 (21), 5537–5548, 2021
622021
Computational design of new peptide inhibitors for amyloid beta (Aβ) aggregation in Alzheimer's disease: application of a novel methodology
G Eskici, M Gur
Plos one 8 (6), e66178, 2013
602013
Microseconds simulations reveal a new sodium-binding site and the mechanism of sodium-coupled substrate uptake by LeuT
E Zomot, M Gur, I Bahar
Journal of Biological Chemistry 290 (1), 544-555, 2015
542015
Energy landscape of LeuT from molecular simulations
M Gur, E Zomot, MH Cheng, I Bahar
The Journal of chemical physics 143 (24), 2015
402015
Omicron BA. 1 and BA. 2 variants increase the interactions of SARS-CoV-2 spike glycoprotein with ACE2
M Golcuk, A Yildiz, M Gur
Journal of Molecular Graphics and Modelling, 108286, 2022
392022
A novel small-molecule antagonizes PRMT5-mediated KLF4 methylation for targeted therapy
Z Zhou, Z Feng, D Hu, P Yang, M Gur, I Bahar, M Cristofanilli, ...
EBioMedicine 44, 98-111, 2019
342019
Effect of Dimerization on the Dynamics of Neurotransmitter: Sodium Symporters
M Gur, MH Cheng, E Zomot, I Bahar
The Journal of Physical Chemistry B, 2017
232017
Statistical thermodynamics of residue fluctuations in native proteins
ON Yogurtcu, M Gur, B Erman
The Journal of chemical physics 130 (9), 2009
232009
Molecular dynamics simulations of site point mutations in the TPR domain of cyclophilin 40 identify conformational states with distinct dynamic and enzymatic properties
M Gur, EA Blackburn, J Ning, V Narayan, KL Ball, MD Walkinshaw, ...
The Journal of Chemical Physics 148, 145101, 2018
202018
Molecular dynamics simulations provide molecular insights into the role of HLA‐B51 in Behçet's disease pathogenesis
M Gur, M Golcuk, A Gul, B Erman
Chemical Biology & Drug Design 96 (1), 644-658, 2020
162020
Combining optimal control theory and molecular dynamics for protein folding
Y Arkun, M Gur
PLoS One 7 (1), e29628, 2012
152012
Binding mechanism of neutralizing Nanobodies targeting SARS-CoV-2 Spike Glycoprotein
M Golcuk, A Hacisuleyman, B Erman, A Yildiz, M Gur
Journal of Chemical Information and Modeling 61 (10), 5152–5160, 2021
122021
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