Interplay between arginine methylation and ubiquitylation regulates KLF4-mediated genome stability and carcinogenesis D Hu, M Gur, Z Zhou, A Gamper, MC Hung, N Fujita, L Lan, I Bahar, ... Nature communications 6 (1), 8419, 2015 | 149 | 2015 |
Conformational transition of SARS-CoV-2 spike glycoprotein between its closed and open states M Gur, E Taka, SZ Yilmaz, C Kilinc, U Aktas, M Golcuk The Journal of Chemical Physics 153, 075101, 2020 | 133 | 2020 |
Exploring the conformational transitions of biomolecular systems using a simple two-state anisotropic network model A Das, M Gur, MH Cheng, S Jo, I Bahar, B Roux PLoS computational biology 10 (4), e1003521, 2014 | 130 | 2014 |
Pre‐existing soft modes of motion uniquely defined by native contact topology facilitate ligand binding to proteins L Meireles, M Gur, A Bakan, I Bahar Protein Science 20 (10), 1645-1658, 2011 | 106 | 2011 |
Global transitions of proteins explored by a multiscale hybrid methodology: application to adenylate kinase M Gur, JD Madura, I Bahar Biophysical journal 105 (7), 1643-1652, 2013 | 87 | 2013 |
Global motions exhibited by proteins in micro-to milliseconds simulations concur with anisotropic network model predictions M Gur, E Zomot, I Bahar The Journal of chemical physics 139 (12), 2013 | 87 | 2013 |
Structural and functional insight into regulation of kinesin-1 by microtubule-associated protein MAP7 LS Ferro, Q Fang, L Eshun-Wilson, J Fernandes, A Jack, DP Farrell, ... Science 375 (6578), 326-331, 2022 | 81 | 2022 |
Directionality of dynein is controlled by the angle and length of its stalk S Can, S Lacey, M Gur, AP Carter, A Yildiz Nature 566 (7744), 407-410, 2019 | 68 | 2019 |
Critical interactions between the SARS-CoV-2 spike glycoprotein and the human ACE2 receptor E Taka, SZ Yilmaz, M Golcuk, C Kilinc, U Aktas, A Yildiz, M Gur The Journal of Physical Chemistry B 125 (21), 5537–5548, 2021 | 62 | 2021 |
Computational design of new peptide inhibitors for amyloid beta (Aβ) aggregation in Alzheimer's disease: application of a novel methodology G Eskici, M Gur Plos one 8 (6), e66178, 2013 | 60 | 2013 |
Microseconds simulations reveal a new sodium-binding site and the mechanism of sodium-coupled substrate uptake by LeuT E Zomot, M Gur, I Bahar Journal of Biological Chemistry 290 (1), 544-555, 2015 | 54 | 2015 |
Energy landscape of LeuT from molecular simulations M Gur, E Zomot, MH Cheng, I Bahar The Journal of chemical physics 143 (24), 2015 | 40 | 2015 |
Omicron BA. 1 and BA. 2 variants increase the interactions of SARS-CoV-2 spike glycoprotein with ACE2 M Golcuk, A Yildiz, M Gur Journal of Molecular Graphics and Modelling, 108286, 2022 | 39 | 2022 |
A novel small-molecule antagonizes PRMT5-mediated KLF4 methylation for targeted therapy Z Zhou, Z Feng, D Hu, P Yang, M Gur, I Bahar, M Cristofanilli, ... EBioMedicine 44, 98-111, 2019 | 34 | 2019 |
Effect of Dimerization on the Dynamics of Neurotransmitter: Sodium Symporters M Gur, MH Cheng, E Zomot, I Bahar The Journal of Physical Chemistry B, 2017 | 23 | 2017 |
Statistical thermodynamics of residue fluctuations in native proteins ON Yogurtcu, M Gur, B Erman The Journal of chemical physics 130 (9), 2009 | 23 | 2009 |
Molecular dynamics simulations of site point mutations in the TPR domain of cyclophilin 40 identify conformational states with distinct dynamic and enzymatic properties M Gur, EA Blackburn, J Ning, V Narayan, KL Ball, MD Walkinshaw, ... The Journal of Chemical Physics 148, 145101, 2018 | 20 | 2018 |
Molecular dynamics simulations provide molecular insights into the role of HLA‐B51 in Behçet's disease pathogenesis M Gur, M Golcuk, A Gul, B Erman Chemical Biology & Drug Design 96 (1), 644-658, 2020 | 16 | 2020 |
Combining optimal control theory and molecular dynamics for protein folding Y Arkun, M Gur PLoS One 7 (1), e29628, 2012 | 15 | 2012 |
Binding mechanism of neutralizing Nanobodies targeting SARS-CoV-2 Spike Glycoprotein M Golcuk, A Hacisuleyman, B Erman, A Yildiz, M Gur Journal of Chemical Information and Modeling 61 (10), 5152–5160, 2021 | 12 | 2021 |