| MITOS: improved de novo metazoan mitochondrial genome annotation M Bernt, A Donath, F Jühling, F Externbrink, C Florentz, G Fritzsch, J Pütz, ... Molecular phylogenetics and evolution 69 (2), 313-319, 2013 | 4795 | 2013 |
| tRNAdb 2009: compilation of tRNA sequences and tRNA genes F Jühling, M Mörl, RK Hartmann, M Sprinzl, PF Stadler, J Pütz Nucleic acids research 37 (suppl_1), D159-D162, 2009 | 939 | 2009 |
| Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes A Donath, F Jühling, M Al-Arab, SH Bernhart, F Reinhardt, PF Stadler, ... Nucleic acids research 47 (20), 10543-10552, 2019 | 455 | 2019 |
| Metilene: fast and sensitive calling of differentially methylated regions from bisulfite sequencing data F Jühling, H Kretzmer, SH Bernhart, C Otto, PF Stadler, S Hoffmann Genome research 26 (2), 256-262, 2016 | 337 | 2016 |
| Improved systematic tRNA gene annotation allows new insights into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangements F Jühling, J Pütz, M Bernt, A Donath, M Middendorf, C Florentz, PF Stadler Nucleic acids research 40 (7), 2833-2845, 2012 | 276 | 2012 |
| HCV-induced epigenetic changes associated with liver cancer risk persist after sustained virologic response N Hamdane, F Jühling, E Crouchet, H El Saghire, C Thumann, MA Oudot, ... Gastroenterology 156 (8), 2313-2329. e7, 2019 | 232 | 2019 |
| A comprehensive analysis of bilaterian mitochondrial genomes and phylogeny M Bernt, C Bleidorn, A Braband, J Dambach, A Donath, G Fritzsch, ... Molecular Phylogenetics and Evolution 69 (2), 352-364, 2013 | 221 | 2013 |
| Structure of transfer RNAs: similarity and variability R Giegé, F Jühling, J Pütz, P Stadler, C Sauter, C Florentz Wiley Interdisciplinary Reviews: RNA 3 (1), 37-61, 2012 | 193 | 2012 |
| Hepatitis C-related hepatocellular carcinoma in the era of new generation antivirals TF Baumert, F Jühling, A Ono, Y Hoshida BMC medicine 15, 1-10, 2017 | 164 | 2017 |
| DNA methylome analysis in Burkitt and follicular lymphomas identifies differentially methylated regions linked to somatic mutation and transcriptional control H Kretzmer, SH Bernhart, W Wang, A Haake, MA Weniger, AK Bergmann, ... Nature genetics 47 (11), 1316-1325, 2015 | 148 | 2015 |
| Changes of bivalent chromatin coincide with increased expression of developmental genes in cancer SH Bernhart, H Kretzmer, LM Holdt, F Jühling, O Ammerpohl, ... Scientific reports 6 (1), 37393, 2016 | 124 | 2016 |
| Combined analysis of metabolomes, proteomes, and transcriptomes of hepatitis C virus–infected cells and liver to identify pathways associated with disease development J Lupberger, T Croonenborghs, AAR Suarez, N Van Renne, F Jühling, ... Gastroenterology 157 (2), 537-551. e9, 2019 | 99 | 2019 |
| Targeting clinical epigenetic reprogramming for chemoprevention of metabolic and viral hepatocellular carcinoma F Jühling, N Hamdane, E Crouchet, S Li, H El Saghire, A Mukherji, ... Gut 70 (1), 157-169, 2021 | 73 | 2021 |
| Genomic and transcriptomic heterogeneity of colorectal tumours arising in Lynch syndrome H Binder, L Hopp, MR Schweiger, S Hoffmann, F Jühling, M Kerick, ... The Journal of pathology 243 (2), 242-254, 2017 | 67 | 2017 |
| Biological evidence for the world's smallest tRNAs S Wende, EG Platzer, F Jühling, J Pütz, C Florentz, PF Stadler, M Mörl Biochimie 100, 151-158, 2014 | 63 | 2014 |
| Fast assembly of the mitochondrial genome of a plant parasitic nematode (Meloidogyne graminicola) using next generation sequencing G Besnard, F Jühling, E Chapuis, L Zedane, É Lhuillier, T Mateille, ... Comptes Rendus. Biologies 337 (5), 295-301, 2014 | 58 | 2014 |
| Armless mitochondrial tRNAs in enoplea (nematoda) F Jühling, J Pütz, C Florentz, PF Stadler RNA biology 9 (9), 1161-1166, 2012 | 56 | 2012 |
| Oxidative stress triggers selective tRNA retrograde transport in human cells during the integrated stress response H Schwenzer, F Jühling, A Chu, LJ Pallett, TF Baumert, M Maini, A Fassati Cell reports 26 (12), 3416-3428. e5, 2019 | 45 | 2019 |
| A first Glimpse at the genome of the Baikalian amphipod Eulimnogammarus verrucosus L Rivarola‐Duarte, C Otto, F Jühling, S Schreiber, D Bedulina, L Jakob, ... Journal of Experimental Zoology Part B: Molecular and Developmental …, 2014 | 36 | 2014 |
| Functional microRNA screen uncovers O-linked N-acetylglucosamine transferase as a host factor modulating hepatitis C virus morphogenesis and infectivity K Herzog, S Bandiera, S Pernot, C Fauvelle, F Jühling, A Weiss, A Bull, ... Gut 69 (2), 380-392, 2020 | 35 | 2020 |
Peter F StadlerProfessor of Bioinformatics, Univ. LeipzigVerified email at bioinf.uni-leipzig.de
