Kai Ye

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Michael WendlAssociate Professor, Washington UniversityVerified email at wustl.edu
Beifang NiuResearch professor at Computer Network Information Center of Chinese Academy of Sciences (CNIC)Verified email at cnic.cn
Michael D McLellanThe Genome Institute at Washington University School of MedicineVerified email at wustl.edu
Matthew WyczalkowskiWashington University in St. LouisVerified email at wustl.edu
Xie MingchaoWashington University in St LouisVerified email at genome.wustl.edu
Zemin NingThe Wellcome Trust Sanger InstituteVerified email at sanger.ac.uk
Li Guo 郭立Principal Investigator, Peking University IAASVerified email at pku-iaas.edu.cn
P. Eline SlagboomProfessor Molecular Epidemiology, Leiden University Medical CenterVerified email at lumc.nl
Xiaofei Yang - 杨晓飞Xi'an Jiaotong UniversityVerified email at xjtu.edu.cn
Peng JiaXi'an Jiaotong UniversityVerified email at stu.xjtu.edu.cn
Joshua McMichaelBusiness and Technical Analyst IIVerified email at genome.wustl.edu
Ben RaphaelProfessor of Computer Science, Princeton UniversityVerified email at princeton.edu
Quan LongUniversity of CalgaryVerified email at ucalgary.ca
Jiadong LinXi'an Jiaotong UniversityVerified email at stu.xjtu.edu.cn
Chris MillerAssociate Professor, Washington University in St LouisVerified email at wustl.edu
Richard K. Wilson, Ph.D.Nationwide Children's Hospital; Ohio State UniversityVerified email at NationwideChildrens.org
TJ LeyProfessor of Medicine and Genetics, Washington University School of MedicineVerified email at wustl.edu
Fabio VandinUniversity of PadovaVerified email at unipd.it
Cyriac KandothUniversity of California Los AngelesVerified email at mednet.ucla.edu
Paul I W de BakkerVertex PharmaceuticalsVerified email at vrtx.com

Kai Ye

Xi'an Jiaotong University

Verified email at xjtu.edu.cn - Homepage

bioinformatics pharmacology cancer


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
A global reference for human genetic variation 1000 Genomes Project Consortium Nature 526 (7571), 68, 2015	15863	2015
A map of human genome variation from population scale sequencing 1000 Genomes Project Consortium Nature 467 (7319), 1061, 2010	8904	2010
An integrated map of genetic variation from 1,092 human genomes 1000 Genomes Project Consortium Nature 491 (7422), 56, 2012	8540	2012
Integrated genomic characterization of endometrial carcinoma DA Levine, ... Nature 497 (7447), 67-73, 2013	5165	2013
Mutational landscape and significance across 12 major cancer types C Kandoth, MD McLellan, F Vandin, K Ye, B Niu, C Lu, M Xie, Q Zhang, ... Nature 502 (7471), 333-339, 2013	4913	2013
Comprehensive molecular profiling of lung adenocarcinoma Cancer Genome Atlas Research Network Nature 511 (7511), 543, 2014	4835*	2014
An integrated map of structural variation in 2,504 human genomes PH Sudmant, T Rausch, EJ Gardner, RE Handsaker, A Abyzov, ... Nature 526 (7571), 75-81, 2015	2491	2015
Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads K Ye, MH Schulz, Q Long, R Apweiler, Z Ning Bioinformatics 25 (21), 2865-2871, 2009	2296	2009
A comprehensive catalogue of somatic mutations from a human cancer genome ED Pleasance, RK Cheetham, PJ Stephens, DJ McBride, SJ Humphray, ... Nature 463 (7278), 191-196, 2010	2058	2010
Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020	1743	2020
A systematic survey of loss-of-function variants in human protein-coding genes DG MacArthur, S Balasubramanian, A Frankish, N Huang, J Morris, ... Science 335 (6070), 823-828, 2012	1411	2012
Mapping copy number variation by population-scale genome sequencing RE Mills, K Walter, C Stewart, RE Handsaker, K Chen, C Alkan, A Abyzov, ... Nature 470 (7332), 59-65, 2011	1315	2011
Multi-platform discovery of haplotype-resolved structural variation in human genomes MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, ... Nature communications 10 (1), 1784, 2019	814	2019
Demographic history and rare allele sharing among human populations S Gravel, BM Henn, RN Gutenkunst, AR Indap, GT Marth, AG Clark, F Yu, ... Proceedings of the National Academy of Sciences 108 (29), 11983-11988, 2011	733	2011
Whole-genome sequence variation, population structure and demographic history of the Dutch population Nature genetics 46 (8), 818-825, 2014	729	2014
MSIsensor: microsatellite instability detection using paired tumor-normal sequence data B Niu, K Ye, Q Zhang, C Lu, M Xie, MD McLellan, MC Wendl, L Ding Bioinformatics 30 (7), 1015-1016, 2014	721	2014
Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ... Nature genetics 52 (3), 331-341, 2020	612	2020
Haplotype-resolved diverse human genomes and integrated analysis of structural variation P Ebert, PA Audano, Q Zhu, B Rodriguez-Martin, D Porubsky, MJ Bonder, ... Science 372 (6537), eabf7117, 2021	522	2021
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel O Delaneau, J Marchini Nature communications 5 (1), 3934, 2014	458	2014
Genome-wide patterns and properties of de novo mutations in humans LC Francioli, PP Polak, A Koren, A Menelaou, S Chun, I Renkens, ... Nature genetics 47 (7), 822-826, 2015	423	2015

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