Taner Sen

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Andrzej KloczkowskiProfessor of Pediatrics, The Ohio State University, Institute for Genomic Medicine, NCHVerified email at osu.edu
Carson AndorfComputational Biologist, USDA-ARSVerified email at iastate.edu
Robert JerniganCurtiss Distinguished Professor in Biochemistry, Biophysics & Molecular Biology, Iowa StateVerified email at iastate.edu
Mary SchaefferGeneticist USDA ARS and adj professor University of MissouriVerified email at missouri.edu
Carolyn J. Lawrence-DillCollege of Agricultural Sciences, Colorado State UniversityVerified email at colostate.edu
Darwin CampbellProject Coordinator, Iowa State UniversityVerified email at iastate.edu
Jack GardinerMaizeGDB Data Curator on location at the University of MissouriVerified email at missouri.edu
Ragothaman M. YennamalliSenior Assistant Professor, SASTRA Deemed to be University, IndiaVerified email at scbt.sastra.ac.in
Margaret WoodhouseComputational Biologist, USDA-ARSVerified email at margaretwoodhouse.com
Halise Busra CagiriciStanford UniversityVerified email at stanford.edu
AJ RaderDirector of Data Scientist at DMC InsuranceVerified email at dmcinsurance.com
Jeffrey D WoltProfessor Emeritus, Iowa State UniversityVerified email at iastate.edu
Hikmet BudakArizona Western CollegeVerified email at unl.edu
Mohammed A SharafIstanbul University-Cerrahpasa (formerly)Verified email at istanbul.edu.tr
Nicholas TinkerHonorary Research Associate, Agriculture and Agri-Food CanadaVerified email at elfinwood.com
Vasant G HonavarDorothy Foehr Huck and J. Lloyd Huck Chair in Biomedical Data Sciences and Artificial IntelligenceVerified email at psu.edu
Kokulapalan WimalanathanAtalanta TherapeuticsVerified email at atalantatx.com
Ivet BaharDirector, Laufer Center for Physical & Quantitative Biology, Stony Brook UniversityVerified email at pitt.edu
Pankaj JaiswalProfessor, Botany and Plant Pathology, Oregon State UniversityVerified email at science.oregonstate.edu
Doreen WareUSDA ARSVerified email at cshl.edu

Taner Sen

Research Scientist, USDA-ARS, GrainGenes / Adj. Prof., UC Berkeley

Verified email at usda.gov

Computational Biology Data Management


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
MaizeGDB 2018: the maize multi-genome genetics and genomics database JL Portwood, MR Woodhouse, EK Cannon, JM Gardiner, LC Harper, ... Nucleic acids research 47 (D1), D1146-D1154, 2019	283	2019
GOR V server for protein secondary structure prediction TZ Sen, RL Jernigan, J Garnier, A Kloczkowski Bioinformatics 21 (11), 2787-2788, 2005	260	2005
MaizeGDB update: new tools, data and interface for the maize model organism database CM Andorf, EK Cannon, JL Portwood, JM Gardiner, LC Harper, ... Nucleic acids research 44 (D1), D1195-D1201, 2016	223	2016
Endoglucanases: insights into thermostability for biofuel applications RM Yennamalli, AJ Rader, AJ Kenny, JD Wolt, TZ Sen Biotechnology for biofuels 6, 1-9, 2013	158	2013
MaizeGDB: the maize model organism database for basic, translational, and applied research CJ Lawrence, LC Harper, ML Schaeffer, TZ Sen, TE Seigfried, ... International journal of plant genomics 2008, 2008	130	2008
The Locus Lookup tool at MaizeGDB: identification of genomic regions in maize by integrating sequence information with physical and genetic maps CM Andorf, CJ Lawrence, LC Harper, ML Schaeffer, DA Campbell, ... Bioinformatics 26 (3), 434-436, 2010	109	2010
Maize metabolic network construction and transcriptome analysis MK Monaco, TZ Sen, PD Dharmawardhana, L Ren, M Schaeffer, ... The Plant Genome 6 (1), plantgenome2012.09.0025, 2013	101	2013
MaizeGDB: curation and outreach go hand-in-hand ML Schaeffer, LC Harper, JM Gardiner, CM Andorf, DA Campbell, ... Database 2011, bar022, 2011	95	2011
GrainGenes: centralized small grain resources and digital platform for geneticists and breeders VC Blake, MR Woodhouse, GR Lazo, SG Odell, CP Wight, NA Tinker, ... Database 2019, baz065, 2019	92	2019
The extent of cooperativity of protein motions observed with elastic network models is similar for atomic and coarser-grained models TZ Sen, Y Feng, JV Garcia, A Kloczkowski, RL Jernigan Journal of chemical theory and computation 2 (3), 696-704, 2006	88	2006
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture L Harper, J Campbell, EKS Cannon, S Jung, M Poelchau, R Walls, ... Database 2018, bay088, 2018	83	2018
The ribosome structure controls and directs mRNA entry, translocation and exit dynamics O Kurkcuoglu, P Doruker, TZ Sen, A Kloczkowski, RL Jernigan Physical biology 5 (4), 046005, 2008	77	2008
Some simulations on filler reinforcement in elastomers JE Mark, R Abou-Hussein, TZ Sen, A Kloczkowski Polymer 46 (21), 8894-8904, 2005	72	2005
Thermostability in endoglucanases is fold-specific RM Yennamalli, AJ Rader, JD Wolt, TZ Sen BMC structural biology 11, 1-15, 2011	71	2011
Functional clustering of yeast proteins from the protein-protein interaction network TZ Sen, A Kloczkowski, RL Jernigan BMC bioinformatics 7, 1-13, 2006	66	2006
GrainGenes: a data-rich repository for small grains genetics and genomics E Yao, VC Blake, L Cooper, CP Wight, S Michel, HB Cagirici, GR Lazo, ... Database 2022, baac034, 2022	56	2022
MaizeGDB becomes ‘sequence-centric’ TZ Sen, CM Andorf, ML Schaeffer, LC Harper, ME Sparks, J Duvick, ... Database 2009, bap020, 2009	56	2009
Choosing a genome browser for a Model Organism Database: surveying the maize community TZ Sen, LC Harper, ML Schaeffer, CM Andorf, TE Seigfried, DA Campbell, ... Database 2010, baq007, 2010	53	2010
Prediction of protein secondary structure by mining structural fragment database H Cheng, TZ Sen, A Kloczkowski, D Margaritis, RL Jernigan Polymer 46 (12), 4314-4321, 2005	51	2005
The effect of natural rubber crosslink density on real time birefringence, true stress and true strain behavior D Valladares, S Toki, TZ Sen, B Yalcin, M Cakmak Macromolecular Symposia 185 (1), 149-166, 2002	47	2002

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