| Assessment of contact predictions in CASP12: co‐evolution and deep learning coming of age J Schaarschmidt, B Monastyrskyy, A Kryshtafovych, AMJJ Bonvin Proteins: Structure, Function, and Bioinformatics 86, 51-66, 2018 | 230 | 2018 |
| Large-scale prediction of binding affinity in protein–small ligand complexes: The PRODIGY-LIG web server A Vangone, J Schaarschmidt, P Koukos, C Geng, N Citro, ME Trellet, ... Bioinformatics 35 (9), 1585-1587, 2019 | 175 | 2019 |
| Blind prediction of homo‐and hetero‐protein complexes: The CASP13‐CAPRI experiment MF Lensink, G Brysbaert, N Nadzirin, S Velankar, RAG Chaleil, T Gerguri, ... Proteins: Structure, Function, and Bioinformatics 87 (12), 1200-1221, 2019 | 125 | 2019 |
| Performance of HADDOCK and a simple contact-based protein–ligand binding affinity predictor in the D3R Grand Challenge 2 Z Kurkcuoglu, PI Koukos, N Citro, ME Trellet, J Rodrigues, IS Moreira, ... Journal of computer-aided molecular design 32, 175-185, 2018 | 124 | 2018 |
| SpotOn: high accuracy identification of protein-protein interface hot-spots IS Moreira, PI Koukos, R Melo, JG Almeida, AJ Preto, J Schaarschmidt, ... Scientific reports 7 (1), 8007, 2017 | 96 | 2017 |
| An environment for sustainable research software in Germany and beyond: current state, open challenges, and call for action H Anzt, F Bach, S Druskat, F Löffler, A Loewe, BY Renard, G Seemann, ... F1000Research 9, 295, 2021 | 69 | 2021 |
| The DisVis and PowerFit web servers: explorative and integrative modeling of biomolecular complexes GCP Van Zundert, M Trellet, J Schaarschmidt, Z Kurkcuoglu, M David, ... Journal of molecular biology 429 (3), 399-407, 2017 | 56 | 2017 |
| Workflow Engineering in Materials Design within the BATTERY 2030+ Project J Schaarschmidt, J Yuan, T Strunk, I Kondov, SP Huber, G Pizzi, L Kahle, ... Advanced Energy Materials 12 (17), 2102638, 2022 | 42 | 2022 |
| Somatic mutations in 33 benign and malignant hot thyroid nodules in children and adolescents M Eszlinger, M Niedziela, E Typlt, H Jaeschke, S Huth, J Schaarschmidt, ... Molecular and cellular endocrinology 393 (1-2), 39-45, 2014 | 38 | 2014 |
| Influence of the hinge region and its adjacent domains on binding and signaling patterns of the thyrotropin and follitropin receptor J Schaarschmidt, S Huth, R Meier, R Paschke, H Jaeschke PLoS One 9 (10), e111570, 2014 | 27 | 2014 |
| The HADDOCK2. 4 web server for integrative modeling of biomolecular complexes RV Honorato, ME Trellet, B Jiménez-García, JJ Schaarschmidt, M Giulini, ... Nature Protocols, 1-23, 2024 | 26 | 2024 |
| Shared metadata for data-centric materials science LM Ghiringhelli, C Baldauf, T Bereau, S Brockhauser, C Carbogno, ... Scientific Data 10 (1), 626, 2023 | 22 | 2023 |
| Rearrangement of the extracellular domain/extracellular loop 1 interface is critical for thyrotropin receptor activation J Schaarschmidt, MBM Nagel, S Huth, H Jaeschke, R Moretti, V Hintze, ... Journal of Biological Chemistry 291 (27), 14095-14108, 2016 | 21 | 2016 |
| Natural helix 9 mutants of PPARγ differently affect its transcriptional activity MF Broekema, MPG Massink, C Donato, J de Ligt, J Schaarschmidt, ... Molecular metabolism 20, 115-127, 2019 | 18 | 2019 |
| The hinge region of the TSH receptor stabilizes ligand binding and determines different signaling profiles of human and bovine TSH H Jaeschke, J Schaarschmidt, R Günther, S Mueller Endocrinology 152 (10), 3986-3996, 2011 | 18 | 2011 |
| A newly discovered TSHR variant (L665F) associated with nonautoimmune hyperthyroidism in an Austrian family induces constitutive TSHR activation by steric repulsion between TM1 … H Jaeschke, J Schaarschmidt, M Eszlinger, S Huth, R Puttinger, ... The Journal of Clinical Endocrinology & Metabolism 99 (10), E2051-E2059, 2014 | 16 | 2014 |
| Identification of novel TSH interaction sites by systematic binding analysis of the TSHR hinge region S Mueller, MW Szkudlinski, J Schaarschmidt, R Günther, R Paschke, ... Endocrinology 152 (8), 3268-3278, 2011 | 16 | 2011 |
| SimStack: an intuitive workflow framework CRC Rêgo, J Schaarschmidt, T Schlöder, M Penaloza-Amion, S Bag, ... Frontiers in Materials 9, 877597, 2022 | 15 | 2022 |
| An overview of data‐driven HADDOCK strategies in CAPRI rounds 38‐45 PI Koukos, J Roel‐Touris, F Ambrosetti, C Geng, J Schaarschmidt, ... Proteins: Structure, Function, and Bioinformatics 88 (8), 1029-1036, 2020 | 15 | 2020 |
| Controversial constitutive TSHR activity: patients, physiology, and in vitro characterization S Huth, H Jaeschke, J Schaarschmidt, R Paschke Hormone and Metabolic Research 46 (07), 453-461, 2014 | 15 | 2014 |
