| The microbiome modulating activity of bile acids Y Tian, W Gui, I Koo, PB Smith, EL Allman, RG Nichols, B Rimal, J Cai, ... Gut microbes 11 (4), 979-996, 2020 | 173 | 2020 |
| Intestinal microbiota-derived tryptophan metabolites are predictive of Ah receptor activity F Dong, F Hao, IA Murray, PB Smith, I Koo, AM Tindall, PM Kris-Etherton, ... Gut microbes 12 (1), 1788899, 2020 | 172 | 2020 |
| The pretreatment gut microbiome is associated with lack of response to methotrexate in new‐onset rheumatoid arthritis A Artacho, S Isaac, R Nayak, A Flor‐Duro, M Alexander, I Koo, ... Arthritis & rheumatology 73 (6), 931-942, 2021 | 112 | 2021 |
| Comparative analysis of mass spectral matching-based compound identification in gas chromatography–mass spectrometry I Koo, S Kim, X Zhang Journal of chromatography A 1298, 132-138, 2013 | 99 | 2013 |
| Wavelet-and Fourier-transform-based spectrum similarity approaches to compound identification in gas chromatography/mass spectrometry I Koo, X Zhang, S Kim Analytical chemistry 83 (14), 5631-5638, 2011 | 97 | 2011 |
| Berberine directly affects the gut microbiota to promote intestinal farnesoid X receptor activation Y Tian, J Cai, W Gui, RG Nichols, I Koo, J Zhang, M Anitha, AD Patterson Drug Metabolism and Disposition 47 (2), 86-93, 2019 | 95 | 2019 |
| MetSign: a computational platform for high-resolution mass spectrometry-based metabolomics X Wei, W Sun, X Shi, I Koo, B Wang, J Zhang, X Yin, Y Tang, B Bogdanov, ... Analytical chemistry 83 (20), 7668-7675, 2011 | 91 | 2011 |
| Compound identification in GC-MS by simultaneously evaluating the mass spectrum and retention index X Wei, I Koo, S Kim, X Zhang Analyst 139 (10), 2507-2514, 2014 | 89 | 2014 |
| Metabolomic analysis of the effects of chronic arsenic exposure in a mouse model of diet-induced fatty liver disease X Shi, X Wei, I Koo, RH Schmidt, X Yin, SH Kim, A Vaughn, CJ McClain, ... Journal of proteome research 13 (2), 547-554, 2014 | 76 | 2014 |
| A method of finding optimal weight factors for compound identification in gas chromatography–mass spectrometry S Kim, I Koo, X Wei, X Zhang Bioinformatics 28 (8), 1158-1163, 2012 | 72 | 2012 |
| Compound identification using partial and semipartial correlations for gas chromatography–mass spectrometry data S Kim, I Koo, J Jeong, S Wu, X Shi, X Zhang Analytical chemistry 84 (15), 6477-6487, 2012 | 65 | 2012 |
| Multivariate classification of urine metabolome profiles for breast cancer diagnosis Y Kim, I Koo, BH Jung, BC Chung, D Lee Proceedings of the third international workshop on Data and text mining in …, 2009 | 65 | 2009 |
| MetPP: a computational platform for comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry-based metabolomics X Wei, X Shi, I Koo, S Kim, RH Schmidt, GE Arteel, WH Watson, ... Bioinformatics 29 (14), 1786-1792, 2013 | 64 | 2013 |
| iMatch2: Compound identification using retention index for analysis of gas chromatography–mass spectrometry data I Koo, X Shi, S Kim, X Zhang Journal of Chromatography a 1337, 202-210, 2014 | 55 | 2014 |
| Bile salt hydrolase catalyses formation of amine-conjugated bile acids B Rimal, SL Collins, CE Tanes, ER Rocha, MA Granda, S Solanki, ... Nature 626 (8000), 859-863, 2024 | 53 | 2024 |
| Current challenges and recent developments in mass spectrometry–based metabolomics SL Collins, I Koo, JM Peters, PB Smith, AD Patterson Annual review of analytical chemistry 14 (1), 467-487, 2021 | 50 | 2021 |
| Genetic Effects of FTO and MC4R Polymorphisms on Body Mass in Constitutional Types S Cha, I Koo, BL Park, S Jeong, SM Choi, KS Kim, HD Shin, JY Kim Evidence‐Based Complementary and Alternative Medicine 2011 (1), 106390, 2011 | 46 | 2011 |
| The underappreciated diversity of bile acid modifications I Mohanty, H Mannochio-Russo, JV Schweer, Y El Abiead, W Bittremieux, ... Cell 187 (7), 1801-1818. e20, 2024 | 39 | 2024 |
| Smith-Waterman peak alignment for comprehensive two-dimensional gas chromatography-mass spectrometry S Kim, I Koo, A Fang, X Zhang BMC bioinformatics 12, 1-11, 2011 | 39 | 2011 |
| Effects of dietary different doses of copper and high fructose feeding on rat fecal metabolome X Wei, M Song, X Yin, DA Schuschke, I Koo, CJ McClain, X Zhang Journal of proteome research 14 (9), 4050-4058, 2015 | 36 | 2015 |