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| Cohesin loss eliminates all loop domains SSP Rao, SC Huang, BG St Hilaire, JM Engreitz, EM Perez, ... Cell 171 (2), 305-320. e24, 2017 | 1832 | 2017 |
| Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes AL Sanborn, SSP Rao, SC Huang, NC Durand, MH Huntley, AI Jewett, ... Proceedings of the National Academy of Sciences 112 (47), E6456-E6465, 2015 | 1805 | 2015 |
| A new dynamical model for the black hole binary LMC X-1 JA Orosz, D Steeghs, JE McClintock, MAP Torres, I Bochkov, L Gou, ... The Astrophysical Journal 697 (1), 573, 2009 | 178 | 2009 |
| Large DNA methylation nadirs anchor chromatin loops maintaining hematopoietic stem cell identity X Zhang, M Jeong, X Huang, XQ Wang, X Wang, W Zhou, MS Shamim, ... Molecular cell 78 (3), 506-521. e6, 2020 | 85 | 2020 |
| The ENCODE uniform analysis pipelines BC Hitz, L Jin-Wook, O Jolanki, MS Kagda, K Graham, P Sud, I Gabdank, ... Biorxiv, 2023 | 79 | 2023 |
| Somatic structural variant formation is guided by and influences genome architecture N Sidiropoulos, BR Mardin, FG Rodríguez-González, ID Bochkov, S Garg, ... Genome research 32 (4), 643-655, 2022 | 23 | 2022 |
| Limited Evidence for Parallel Evolution Among Desert-Adapted Peromyscus Deer Mice JP Colella, A Tigano, O Dudchenko, AD Omer, R Khan, ID Bochkov, ... Journal of Heredity 112 (3), 286-302, 2021 | 17 | 2021 |
| A cell type-specific class of chromatin loops anchored at large DNA methylation nadirs M Jeong, X Huang, X Zhang, J Su, MS Shamim, ID Bochkov, J Reyes, ... Biorxiv, 212928, 2017 | 16 | 2017 |
| Chromatin Extrusion Explains Key Features of Loop and Domain Formation in Wild‐type and Engineered Genomes A Sanborn, S Rao, SC Huang, N Durand, M Huntley, A Jewett, I Bochkov, ... The FASEB Journal 30, 588.1-588.1, 2016 | 5 | 2016 |
| The Hi-Culfite assay reveals relationships between chromatin contacts and DNA methylation state EK Stamenova, NC Durand, O Dudchenko, MS Shamim, SC Huang, ... Biorxiv, 481283, 2018 | 4 | 2018 |
| Multiple Evolutionary Pathways to Achieve Thermal Adaptation in Small Mammals JP Colella, A Tigano, O Dudchenko, AD Omer, R Khan, ID Bochkov, ... bioRxiv [Internet]: 2020.06. 29.178392, 2020 | 2 | 2020 |
| Phased genome scale epigenetic maps and methods for generating maps EL Aiden, G Aglyamova, I Bochkov, O Dudchenko, S Godinez, GU Huiya, ... US Patent App. 18/501,637, 2024 | | 2024 |
| Changes in 3D Genome Architecture During Chondrocyte Differentiation in the Pathogenesis of Human Chondrodysplasias IW Song, I Bochkov, Y Bae, E Aiden, B Lee JOURNAL OF BONE AND MINERAL RESEARCH 34, 74-74, 2019 | | 2019 |
| Large DNA Methylation Canyons Anchor Chromatin Loops Maintaining Hematopoietic Stem Cell Identity M Jeong, X Huang, X Zhang, J Su, MS Shamim, ID Bochkov, JM Reyes, ... Blood, The Journal of the American Society of Hematology 132 (Supplement 1 …, 2018 | | 2018 |
| High Order Chromatin Structure Regulates Gene Expression in Hematopoietic Stem Cell Self-Renewal and Erythroid Differentiation X Zhang, M Jeong, I Bochkov, MS Shamim, EL Aiden, M Goodell Blood 128 (22), 1033, 2016 | | 2016 |
| Crispr Engineering in CD34+ Progenitors Reveals Cis-Acting Regulatory Regions Mediating 3D Interactions and Stem Cell Fate Decisions M Jeong, Y Lei, I Bochkov, MS Shamim, AG Guzman, SC Huang, ... Blood 128 (22), 1466, 2016 | | 2016 |
Erez Lieberman AidenBaylor College of MedicineVerified email at erez.com