Pablo Moreno Cortez

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Christoph SteinbeckFriedrich-Schiller-University JenaVerified email at uni-jena.de
Juan Antonio VizcainoProteomics Team Leader, EMBL-EBIVerified email at ebi.ac.uk
Kenneth HaugbiomodalVerified email at biomodal.com
Pablo Conesa MingoSoftware engineer, National Center for Biotechnology, CSICVerified email at cnb.csic.es
Janna HastingsUniversity of Zurich, University of St. GallenVerified email at uzh.ch
Prof. J.L. GriffinDirector of the Rowett InstituteVerified email at abdn.ac.uk
Tim EbbelsProfessor of Biomedical Data Science, Imperial College LondonVerified email at imperial.ac.uk
Mark R. ViantProfessor of Metabolomics, University of Birmingham, UKVerified email at bham.ac.uk
Steffen NeumannLeibniz Institute of Plant BiochemistryVerified email at ipb-halle.de
R. Andres FlotoUniversity of CambridgeVerified email at cam.ac.uk
Ola SpjuthProfessor at Department of Pharmaceutical Biosciences, Uppsala UniversityVerified email at farmbio.uu.se
Roy GoodacreDepartment of Biochemistry, Cell and Systems Biology, ISMIB, University of LiverpoolVerified email at liverpool.ac.uk
Albert KoulmanUniversity of CambridgeVerified email at medschl.cam.ac.uk
Markus RalserCharité Berlin & University of OxfordVerified email at charite.de
Warwick DunnDepartment of Biochemistry and Systems Biology, ISMIB, University of LiverpoolVerified email at liverpool.ac.uk
Peter ErtlLeading Scientist at Ertl MolecularVerified email at peter-ertl.com
Henning HermjakobHead of Molecular Systems, European Bioinformatics Institute (EMBL-EBI)Verified email at ebi.ac.uk
Michael WakelamBabraham InstituteVerified email at babraham.ac.uk
Nico AdamsJames Cook UniversityVerified email at jcu.edu.au
Ivo GrosseProfessor of Bioinformatics, Martin Luther University Halle-WittenbergVerified email at informatik.uni-halle.de

Pablo Moreno Cortez

Technical Coordinator, European Bioinformatics Institute

Verified email at ebi.ac.uk

Bioinformatics metabolic engineering cheminformatics


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The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update E Afgan, D Baker, B Batut, M Van Den Beek, D Bouvier, M Čech, J Chilton, ... Nucleic acids research 46 (W1), W537-W544, 2018	4298	2018
Emergence and spread of a human-transmissible multidrug-resistant nontuberculous mycobacterium JM Bryant, DM Grogono, D Rodriguez-Rincon, I Everall, KP Brown, ... Science 354 (6313), 751-757, 2016	560	2016
Expression Atlas update: from tissues to single cells I Papatheodorou, P Moreno, J Manning, AMP Fuentes, N George, ... Nucleic acids research 48 (D1), D77-D83, 2020	533	2020
BioContainers: an open-source and community-driven framework for software standardization F da Veiga Leprevost, BA Grüning, S Alves Aflitos, HL Röst, J Uszkoreit, ... Bioinformatics 33 (16), 2580-2582, 2017	520	2017
Navigating freely-available software tools for metabolomics analysis R Spicer, RM Salek, P Moreno, D Cañueto, C Steinbeck Metabolomics 13, 1-16, 2017	254	2017
MetaboLights: An Open‐Access Database Repository for Metabolomics Data NS Kale, K Haug, P Conesa, K Jayseelan, P Moreno, P Rocca‐Serra, ... Current Protocols in Bioinformatics, 14.13. 1-14.13. 18, 2016	190	2016
UCSC Cell Browser: visualize your single-cell data ML Speir, A Bhaduri, NS Markov, P Moreno, TJ Nowakowski, ... Bioinformatics 37 (23), 4578-4580, 2021	171	2021
Expression Atlas update: gene and protein expression in multiple species P Moreno, S Fexova, N George, JR Manning, Z Miao, S Mohammed, ... Nucleic acids research 50 (D1), D129-D140, 2022	129	2022
High-definition analysis of host protein stability during human cytomegalovirus infection reveals antiviral factors and viral evasion mechanisms K Nightingale, KM Lin, BJ Ravenhill, C Davies, L Nobre, CA Fielding, ... Cell host & microbe 24 (3), 447-460. e11, 2018	120	2018
Automated structure prediction of trans-acyltransferase polyketide synthase products EJN Helfrich, R Ueoka, A Dolev, M Rust, RA Meoded, A Bhushan, ... Nature chemical biology 15 (8), 813-821, 2019	118	2019
Putative cell type discovery from single-cell gene expression data Z Miao, P Moreno, N Huang, I Papatheodorou, A Brazma, SA Teichmann Nature methods 17 (6), 621-628, 2020	111	2020
Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy RJM Weber, TN Lawson, RM Salek, TMD Ebbels, RC Glen, R Goodacre, ... Metabolomics 13, 1-5, 2017	97	2017
Natural product-likeness score revisited: an open-source, open-data implementation KV Jayaseelan, P Moreno, A Truszkowski, P Ertl, C Steinbeck BMC bioinformatics 13 (1), 106, 2012	93	2012
LipidHome: a database of theoretical lipids optimized for high throughput mass spectrometry lipidomics JM Foster, P Moreno, A Fabregat, H Hermjakob, C Steinbeck, R Apweiler, ... PloS one 8 (5), e61951, 2013	81	2013
A Spaetzle-like role for nerve growth factor β in vertebrate immunity to Staphylococcus aureus L Hepburn, TK Prajsnar, C Klapholz, P Moreno, CA Loynes, NV Ogryzko, ... Science 346 (6209), 641-646, 2014	80	2014
PhenoMeNal: processing and analysis of metabolomics data in the cloud K Peters, J Bradbury, S Bergmann, M Capuccini, M Cascante, P de Atauri, ... GigaScience 8 (2), giy149, 2019	74	2019
Urinary exosomes contain microRNAs capable of paracrine modulation of tubular transporters in kidney T Gracia, X Wang, Y Su, EE Norgett, TL Williams, P Moreno, G Micklem, ... Scientific Reports 7 (1), 40601, 2017	69	2017
A proteomics sample metadata representation for multiomics integration and big data analysis C Dai, A Füllgrabe, J Pfeuffer, EM Solovyeva, J Deng, P Moreno, ... Nature Communications 12 (1), 5854, 2021	68	2021
Mutations in mitochondrial DNA causing tubulointerstitial kidney disease TM Connor, S Hoer, A Mallett, DP Gale, A Gomez-Duran, V Posse, ... PLoS genetics 13 (3), e1006620, 2017	66	2017
BiNChE: a web tool and library for chemical enrichment analysis based on the ChEBI ontology P Moreno, S Beisken, B Harsha, V Muthukrishnan, I Tudose, A Dekker, ... BMC bioinformatics 16, 1-7, 2015	50	2015

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