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Shanker Shyam Sundhar Panchapakesan
Shanker Shyam Sundhar Panchapakesan
Senior Assistant Professor, SASTRA University
Verified email at scbt.sastra.edu
Title
Cited by
Cited by
Year
RNA mango aptamer-fluorophore: a bright, high-affinity complex for RNA labeling and tracking
EV Dolgosheina, SCY Jeng, SSS Panchapakesan, R Cojocaru, ...
ACS chemical biology 9 (10), 2412-2420, 2014
4512014
Fluorogenic RNA Mango aptamers for imaging small non-coding RNAs in mammalian cells
A Autour, S CY Jeng, A D. Cawte, A Abdolahzadeh, A Galli, ...
Nature communications 9 (1), 656, 2018
2462018
Structural basis for high-affinity fluorophore binding and activation by RNA Mango
RJ Trachman III, NA Demeshkina, MWL Lau, SSS Panchapakesan, ...
Nature chemical biology 13 (7), 807-813, 2017
1342017
E. coli 6S RNA release from RNA polymerase requires σ70 ejection by scrunching and is orchestrated by a conserved RNA hairpin
SSS Panchapakesan, PJ Unrau
Rna 18 (12), 2251-2259, 2012
452012
Ribonucleoprotein purification and characterization using RNA Mango
SSS Panchapakesan, ML Ferguson, EJ Hayden, X Chen, AA Hoskins, ...
Rna 23 (10), 1592-1599, 2017
412017
A second riboswitch class for the enzyme cofactor NAD+
SSS Panchapakesan, L Corey, SN Malkowski, G Higgs, RR Breaker
Rna 27 (1), 99-105, 2021
352021
The case of the missing allosteric ribozymes
SSS Panchapakesan, RR Breaker
Nature chemical biology 17 (4), 375-382, 2021
212021
RNA complex purification using high‐affinity fluorescent RNA aptamer tags
SSS Panchapakesan, SCY Jeng, PJ Unrau
Annals of the New York Academy of Sciences 1341 (1), 149-155, 2015
212015
Variants of the guanine riboswitch class exhibit altered ligand specificities for xanthine, guanine, or 2′-deoxyguanosine
S Hamal Dhakal, SSS Panchapakesan, P Slattery, A Roth, RR Breaker
Proceedings of the National Academy of Sciences 119 (22), e2120246119, 2022
202022
Nemo promotes Notch-mediated lateral inhibition downstream of proneural factors
VM Fernandes, SSS Panchapakesan, LR Braid, EM Verheyen
Developmental biology 392 (2), 334-343, 2014
92014
E. coli 6S RNA complexed to RNA polymerase maintains product RNA synthesis at low cellular ATP levels by initiation with noncanonical initiator nucleotides
CD Bonar, J Han, R Wang, SSS Panchapakesan, PJ Unrau
RNA 28 (12), 1643-1658, 2022
62022
Electrochemical sensing methodology for antibiogram assays
S Menon, N Vishnu, SSS Panchapakesan, AS Kumar, K Sankaran, ...
Journal of The Electrochemical Society 161 (2), B3061, 2013
52013
8-oxoguanine riboswitches in bacteria detect and respond to oxidative DNA damage
S Hamal Dhakal, K Kavita, SSS Panchapakesan, A Roth, RR Breaker
Proceedings of the National Academy of Sciences 120 (40), e2307854120, 2023
42023
A conserved uORF in the ilvBNC mRNA of Corynebacterium species regulates ilv operon expression
A Narunsky, K Kavita, SSS Panchapakesan, ME Fris, RR Breaker
Microbial Genomics 9 (5), 001019, 2023
22023
Purification of RNA Mango tagged native RNA-protein complexes from cellular extracts using TO1-Desthiobiotin fluorophore ligand
SSS Panchapakesan, PJ Jeng, Sunny C.Y., Unrau
Bio-protocol 8 (7), 2018
22018
Transcription factors induce differential splicing of duplicated ribosomal protein genes during meiosis
S Abou Elela, C Petibon, M Catala, D Morales, S Panchapakesan, ...
12023
Electrochemical Detection of Hydrolyzed Fluorescein Diacetate for Cell Viability Tests
S Menon, N Vishnu, SSS Panchapakesan, AS Kumar, K Sankaran, ...
CMBES Proceedings 37, 2014
12014
Turn-on RNA Mango Beacons for trans-acting fluorogenic nucleic acid detection
A Abdolahzadeh, QR Ang, JR Caine, SSS Panchapakesan, S Thio, ...
RNA 30 (4), 392-403, 2024
2024
Fluorogen-binding RNA aptamers
M Ryckelynck, A Autour, P Unrau, E Dolgosheina, SCY Jeng, ...
US Patent 11,434,490, 2022
2022
Fluorogen-binding rna aptamers
M RYCKELYNK, A AUTOUR, P UNRAU, E DOLGOSHEINA, SCY JENG, ...
2018
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