| Integrated genomic analyses of ovarian carcinoma D Bell, A Berchuck, M Birrer, J Chien, DW Cramer Nature 474 (7353), 609-615, 2011 | 7266 | 2011 |
| Identification of a CpG island methylator phenotype that defines a distinct subgroup of glioma H Noushmehr, DJ Weisenberger, K Diefes, HS Phillips, K Pujara, ... Cancer cell 17 (5), 510-522, 2010 | 2826 | 2010 |
| Subtype and pathway specific responses to anticancer compounds in breast cancer LM Heiser, A Sadanandam, WL Kuo, SC Benz, TC Goldstein, S Ng, ... Proceedings of the National Academy of Sciences 109 (8), 2724-2729, 2012 | 553 | 2012 |
| DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly ADGYB Scheinin I, Sie D, Bengtsson H, van de Wiel MA, Olshen AB, van Thuijl ... Genome Research, 2014 | 501 | 2014 |
| Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data B Carvalho, H Bengtsson, TP Speed, RA Irizarry Biostatistics 8 (2), 485-499, 2007 | 373 | 2007 |
| Identification of SOX3 as an XX male sex reversal gene in mice and humans E Sutton, J Hughes, S White, R Sekido, J Tan, V Arboleda, N Rogers, ... The Journal of clinical investigation 121 (1), 328-341, 2011 | 304 | 2011 |
| aroma.affymetrix: A generic framework in R for analyzing small to very large Affymetrix data sets in bounded memory H Bengtsson, K Simpson, J Bullard, K Hansen Technical report #745, Department of Statistics, UC Berkeley, 2008 | 207 | 2008 |
| Estimation and assessment of raw copy numbers at the single locus level H Bengtsson, R Irizarry, B Carvalho, TP Speed Bioinformatics 24 (6), 759-767, 2008 | 192 | 2008 |
| Copy number variation in patients with disorders of sex development due to 46, XY gonadal dysgenesis S White, T Ohnesorg, A Notini, K Roeszler, J Hewitt, H Daggag, C Smith, ... PLOS ONE 6 (3), e17793, 2011 | 173 | 2011 |
| A single-array preprocessing method for estimating full-resolution raw copy numbers from all Affymetrix genotyping arrays including GenomeWideSNP 5 & 6 H Bengtsson, P Wirapati, TP Speed Bioinformatics 25 (17), 2149-2156, 2009 | 170 | 2009 |
| matrixStats: Functions that Apply to Rows and Columns of Matrices (and to Vectors) H Bengtsson R package version 0.52 2, 2017, 2017 | 162 | 2017 |
| Clonal expansion and epigenetic reprogramming following deletion or amplification of mutant IDH1 T Mazor, C Chesnelong, A Pankov, LE Jalbert, C Hong, J Hayes, ... Proceedings of the National Academy of Sciences 114 (40), 10743-10748, 2017 | 152 | 2017 |
| A Unifying Framework for Parallel and Distributed Processing in R using Futures H Bengtsson https://arxiv.org/abs/2008.00553, 2020 | 146 | 2020 |
| Parent-specific copy number in paired tumor–normal studies using circular binary segmentation AB Olshen, H Bengtsson, P Neuvial, PT Spellman, RA Olshen, ... Bioinformatics 27 (15), 2038-2046, 2011 | 133 | 2011 |
| Novel RUNX1 mutations in familial platelet disorder with enhanced risk for acute myeloid leukemia: clues for improved identification of the FPD/AML syndrome MCJ Jongmans, RP Kuiper, CL Carmichael, EJ Wilkins, N Dors, ... Leukemia 24 (1), 242-246, 2009 | 105 | 2009 |
| Cytomegalovirus immediate-early proteins promote stemness properties in glioblastoma L Soroceanu, L Matlaf, S Khan, A Akhavan, E Singer, V Bezrookove, ... Cancer research 75 (15), 3065-3076, 2015 | 98 | 2015 |
| illuminaio: An open source IDAT parsing tool for Illumina microarrays ML Smith, KA Baggerly, H Bengtsson, ME Ritchie, KD Hansen F1000Research 2, 264, 2013 | 77 | 2013 |
| Two distinct routes to oral cancer differing in genome instability and risk for cervical node metastasis A Bhattacharya, R Roy, AM Snijders, G Hamilton, J Paquette, T Tokuyasu, ... Clinical Cancer Research 17 (22), 7024-7034, 2011 | 75 | 2011 |
| TumorBoost: Normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays H Bengtsson, P Neuvial, T Speed BMC Bioinformatics 11 (1), 245, 2010 | 74 | 2010 |
| Calibration and assessment of channel-specific biases in microarray data with extended dynamical range H Bengtsson, G Jönsson, J Vallon-Christersson BMC Bioinformatics 5 (1), 177, 2004 | 68 | 2004 |
Pierre NeuvialCNRS, Institut de Mathématiques de ToulouseVerified email at math.univ-toulouse.fr
