| How conformational dynamics of DNA polymerase select correct substrates: experiments and simulations S Kirmizialtin, V Nguyen, KA Johnson, R Elber Structure 20 (4), 618-627, 2012 | 141 | 2012 |
| Single-molecule electrophoresis of β-hairpin peptides by electrical recordings and Langevin dynamics simulations CP Goodrich, S Kirmizialtin, BM Huyghues-Despointes, A Zhu, JM Scholtz, ... The Journal of Physical Chemistry B 111 (13), 3332-3335, 2007 | 106 | 2007 |
| RNA and its ionic cloud: solution scattering experiments and atomically detailed simulations S Kirmizialtin, SA Pabit, SP Meisburger, L Pollack, R Elber Biophysical journal 102 (4), 819-828, 2012 | 103 | 2012 |
| Taming the topology of calix [4] arene-based 2D-covalent organic frameworks: interpenetrated vs noninterpenetrated frameworks and their selective removal of cationic dyes B Garai, D Shetty, T Skorjanc, F Gándara, N Naleem, S Varghese, ... Journal of the American Chemical Society 143 (9), 3407-3415, 2021 | 98 | 2021 |
| Revisiting and computing reaction coordinates with directional milestoning S Kirmizialtin, R Elber The journal of physical chemistry A 115 (23), 6137-6148, 2011 | 91 | 2011 |
| Topography of the free-energy landscape probed via mechanical unfolding of proteins S Kirmizialtin, L Huang, DE Makarov The Journal of chemical physics 122 (23), 2005 | 85 | 2005 |
| Computer simulations of the translocation and unfolding of a protein pulled mechanically through a pore L Huang, S Kirmizialtin, DE Makarov The Journal of chemical physics 123 (12), 2005 | 84 | 2005 |
| The ionic atmosphere around A-RNA: Poisson-Boltzmann and molecular dynamics simulations S Kirmizialtin, ARJ Silalahi, R Elber, MO Fenley Biophysical journal 102 (4), 829-838, 2012 | 81 | 2012 |
| Computational exploration of mobile ion distributions around RNA duplex S Kirmizialtin, R Elber The Journal of Physical Chemistry B 114 (24), 8207-8220, 2010 | 73 | 2010 |
| The catalytic inactivation of the N-half of human hexokinase 2 and structural and biochemical characterization of its mitochondrial conformation MH Nawaz, JC Ferreira, L Nedyalkova, H Zhu, C Carrasco-López, ... Bioscience reports 38 (1), BSR20171666, 2018 | 70 | 2018 |
| The in vitro selection world K Jijakli, B Khraiwesh, W Fu, L Luo, A Alzahmi, J Koussa, ... Methods 106, 3-13, 2016 | 65 | 2016 |
| Designed cell-penetrating peptide inhibitors of amyloid-beta aggregation and cytotoxicity A Henning-Knechtel, S Kumar, C Wallin, S Król, SKTS Wärmländer, ... Cell Reports Physical Science 1 (2), 2020 | 62 | 2020 |
| Translocation of a β-hairpin-forming peptide through a cylindrical tunnel S Kirmizialtin, V Ganesan, DE Makarov The Journal of chemical physics 121 (20), 10268-10277, 2004 | 61 | 2004 |
| Rapid and efficient removal of perfluorooctanoic acid from water with fluorine-rich calixarene-based porous polymers D Shetty, I Jahovic, T Skorjanc, TS Erkal, L Ali, J Raya, Z Asfari, MA Olson, ... ACS applied materials & interfaces 12 (38), 43160-43166, 2020 | 54 | 2020 |
| Polyelectrolyte properties of single stranded DNA measured using SAXS and single‐molecule FRET: Beyond the wormlike chain model SP Meisburger, JL Sutton, H Chen, SA Pabit, S Kirmizialtin, R Elber, ... Biopolymers 99 (12), 1032-1045, 2013 | 54 | 2013 |
| Redox‐responsive covalent organic nanosheets from viologens and calix [4] arene for iodine and toxic dye capture T Skorjanc, D Shetty, SK Sharma, J Raya, H Traboulsi, DS Han, J Lalla, ... Chemistry–A European Journal 24 (34), 8648-8655, 2018 | 53 | 2018 |
| Calix [4] arene-based porous organic nanosheets D Shetty, T Skorjanc, J Raya, SK Sharma, I Jahovic, K Polychronopoulou, ... ACS applied materials & interfaces 10 (20), 17359-17365, 2018 | 47 | 2018 |
| Revealing the distinct folding phases of an RNA three-helix junction A Plumridge, AM Katz, GD Calvey, R Elber, S Kirmizialtin, L Pollack Nucleic acids research 46 (14), 7354-7365, 2018 | 46 | 2018 |
| Structure-guided DNA–DNA attraction mediated by divalent cations A Srivastava, R Timsina, S Heo, SW Dewage, S Kirmizialtin, X Qiu Nucleic acids research 48 (13), 7018-7026, 2020 | 42 | 2020 |
| Cryo_fit: Democratization of flexible fitting for cryo-EM DN Kim, NW Moriarty, S Kirmizialtin, PV Afonine, B Poon, OV Sobolev, ... Journal of structural biology 208 (1), 1-6, 2019 | 41 | 2019 |
Ron ElberU of Texas at Austin, The Inst for Comput Eng and Sci, and MiTOMED PHARMA, Inc.Verified email at ices.utexas.edu