Ashar J. Malik

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Jane R AllisonAssociate Professor, School of Biological Sciences, University of AucklandVerified email at auckland.ac.nz
Anthony M PooleSchool of Biological Sciences, University of Auckland, New ZealandVerified email at auckland.ac.nz
David AscherUniversity of Queensland; Baker InstituteVerified email at uq.edu.au
Chandra VermaBioinformatics InstituteVerified email at bii.a-star.edu.sg
Nicholas J. MatzkeSenior Lecturer, School of Biological Sciences, University of AucklandVerified email at berkeley.edu
Caroline Puente-LelievreResearch fellowVerified email at aucklanduni.ac.nz
Jordan DouglasUniversity of AucklandVerified email at auckland.ac.nz
Martin SteineggerAssociate Professor, Seoul National University, KoreaVerified email at snu.ac.kr
Remco BouckaertVerified email at cs.auckland.ac.nz
Hyunbin KimInterdisciplinary Program in Bioinformatics, Seoul National University, Seoul, South KoreaVerified email at snu.ac.kr
Matthew S. FullmerLecturer, University of AucklandVerified email at auckland.ac.nz
Matthew A B BakerSchool of Biotechnology and Biomolecular Science, UNSWVerified email at unsw.edu.au
Pietro AronicaSenior Scientist, Bioinformatics Institute, A*STARVerified email at bii.a-star.edu.sg

Ashar J. Malik

Postdoctoral Fellow

Verified email at uq.edu.au

Precision Medicine Molecular Evolution Deep Learning Quantum Computing


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The Singapore national precision medicine strategy E Wong, N Bertin, M Hebrard, R Tirado-Magallanes, C Bellis, WK Lim, ... Nature Genetics 55 (2), 178-186, 2023	54	2023
Structural phylogenetics with confidence AJ Malik, AM Poole, JR Allison Molecular biology and evolution 37 (9), 2711-2726, 2020	28	2020
Tertiary-interaction characters enable fast, model-based structural phylogenetics beyond the twilight zone C Puente-Lelievre, AJ Malik, J Douglas, D Ascher, M Baker, J Allison, ... bioRxiv, 2023.12. 12.571181, 2023	12	2023
Structome: a tool for the rapid assembly of datasets for structural phylogenetics AJ Malik, D Langer, CS Verma, AM Poole, JR Allison Bioinformatics Advances 3 (1), vbad134, 2023	4	2023
DStabilize: a web resource to generate mirror images of biomolecules AJ Malik, PGA Aronica, CS Verma Structure 28 (12), 1358-1360. e2, 2020	2	2020
Exploring deep phylogenies using protein structure: a dissertation submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Biochemistry … AJ Malik Massey University, 2018	2	2018
Structome: Exploring the structural neighbourhood of proteins AJ Malik, CS Verma, AM Poole, JR Allison bioRxiv, 2023.02. 18.529083, 2023	1	2023
Structome-TM: Complementing dataset assembly for structural phylogenetics by addressing size-based biases AJ Malik, DB Ascher bioRxiv, 2025.02. 08.637224, 2025		2025
On use of tertiary structure characters in hidden Markov models for protein fold prediction AJ Malik, C Puente-Lelievre, N Matzke, DB Ascher bioRxiv, 2024.04. 08.588419, 2024		2024
On quantum computing and geometry optimization AJ Malik, CS Verma bioRxiv, 2023.03. 16.532929, 2023		2023
Genomic landscape of drug binding and pharmacogenetic variation across diverse populations using SNPdrug3D S Maurer-Stroh, A Malik, D Kenanov, CS Chong, MB Ozturk, M Hebrard, ...		2023

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