| Trimming of sequence reads alters RNA-Seq gene expression estimates CR Williams, A Baccarella, JZ Parrish, CC Kim BMC bioinformatics 17, 1-13, 2016 | 216 | 2016 |
| JUNB is a key transcriptional modulator of macrophage activation MF Fontana, A Baccarella, N Pancholi, MA Pufall, DBR Herbert, CC Kim The Journal of Immunology 194 (1), 177-186, 2015 | 115 | 2015 |
| FCRL5+ memory B cells exhibit robust recall responses CC Kim, AM Baccarella, A Bayat, M Pepper, MF Fontana Cell reports 27 (5), 1446-1460. e4, 2019 | 100 | 2019 |
| Toll-like receptor 7 mediates early innate immune responses to malaria A Baccarella, MF Fontana, EC Chen, CC Kim Infection and immunity 81 (12), 4431-4442, 2013 | 94 | 2013 |
| Empirical assessment of analysis workflows for differential expression analysis of human samples using RNA-Seq CR Williams, A Baccarella, JZ Parrish, CC Kim BMC bioinformatics 18, 1-12, 2017 | 78 | 2017 |
| Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance A Baccarella, CR Williams, JZ Parrish, CC Kim BMC bioinformatics 19, 1-12, 2018 | 69 | 2018 |
| DISC1–ATF4 transcriptional repression complex: dual regulation of the cAMP-PDE4 cascade by DISC1 T Soda, C Frank, K Ishizuka, A Baccarella, YU Park, Z Flood, SK Park, ... Molecular psychiatry 18 (8), 898-908, 2013 | 65 | 2013 |
| Multiplexed single-cell analysis reveals prognostic and nonprognostic T cell types in human colorectal cancer K Masuda, A Kornberg, J Miller, S Lin, N Suek, T Botella, KA Secener, ... JCI insight 7 (7), 2022 | 46 | 2022 |
| Increased intracranial pressure in the setting of multisystem inflammatory syndrome in children, associated with COVID-19 A Baccarella, A Linder, R Spencer, AJ Jonokuchi, PB King, ... Pediatric neurology 115, 48-49, 2021 | 46 | 2021 |
| Loss of Toll-like receptor 7 alters cytokine production and protects against experimental cerebral malaria A Baccarella, BW Huang, MF Fontana, CC Kim Malaria Journal 13, 1-8, 2014 | 27 | 2014 |
| Adversity in early life and pregnancy are immunologically distinct from total life adversity: macrophage-associated phenotypes in women exposed to interpersonal violence K Aschbacher, M Hagan, IM Steine, L Rivera, S Cole, A Baccarella, ... Translational psychiatry 11 (1), 391, 2021 | 22 | 2021 |
| Detecting pediatric wrist fractures using deep-learning-based object detection JR Zech, G Carotenuto, Z Igbinoba, CV Tran, E Insley, A Baccarella, ... Pediatric Radiology 53 (6), 1125-1134, 2023 | 20 | 2023 |
| Gluten induces rapid reprogramming of natural memory αβ and γδ intraepithelial T cells to induce cytotoxicity in celiac disease A Kornberg, T Botella, CS Moon, S Rao, J Gelbs, L Cheng, J Miller, ... Science immunology 8 (85), eadf4312, 2023 | 18 | 2023 |
| A Novel Model of Asymptomatic Plasmodium Parasitemia That Recapitulates Elements of the Human Immune Response to Chronic Infection MF Fontana, A Baccarella, JF Craft, MJ Boyle, TI McIntyre, MD Wood, ... PLoS One 11 (9), e0162132, 2016 | 17 | 2016 |
| Canakinumab for the treatment of autoinflammatory very early onset-inflammatory bowel disease E Shaul, MA Conrad, N Dawany, T Patel, MC Canavan, A Baccarella, ... Frontiers in Immunology 13, 972114, 2022 | 14 | 2022 |
| Myeloid expression of the AP‐1 transcription factor JUNB modulates outcomes of type 1 and type 2 parasitic infections MF Fontana, A Baccarella, D Kellar, TK Oniskey, P Terinate, ... Parasite immunology 37 (9), 470-478, 2015 | 13 | 2015 |
| An immunogenomic phenotype predicting behavioral treatment response: Toward precision psychiatry for mothers and children with trauma exposure K Aschbacher, S Cole, M Hagan, L Rivera, A Baccarella, OM Wolkowitz, ... Brain, Behavior, and Immunity 99, 350-362, 2022 | 8 | 2022 |
| Multiplexed single-cell analysis reveals prognostic and nonprognostic T cell types in human colorectal cancer. JCI Insight (2022) 7: doi: 10.1172/JCI K Masuda, A Kornberg, J Miller, S Lin, N Suek, T Botella, KA Secener, ... INSIGHT 154646, 0 | 7 | |
| The functional and phenotypic diversity of single T-cell infiltrates in human colorectal cancer as correlated with clinical outcome K Masuda, A Kornberg, S Lin, P Ho, K Secener, N Suek, AM Bacarella, ... bioRxiv, 2020.09. 27.313445, 2020 | 2 | 2020 |
| Mo1793 UNIQUE NATURAL KILLER CELL GENE EXPRESSION SIGNATURE IN A STXBP2 MUTATION CAUSING INFANTILE ONSET VEO-IBD AND HLH A Baccarella, N Dawany, M Conrad, O Pickering, S Gaddipati, M Cohen, ... Gastroenterology 166 (5), S-1113, 2024 | | 2024 |