Efficient ancestry and mutation simulation with msprime 1.0 F Baumdicker, G Bisschop, D Goldstein, G Gower, AP Ragsdale, ... Genetics 220 (3), iyab229, 2022 | 277 | 2022 |
Widespread selection and gene flow shape the genomic landscape during a radiation of monkeyflowers S Stankowski, MA Chase, AM Fuiten, MF Rodrigues, PL Ralph, ... PLoS biology 17 (7), e3000391, 2019 | 122 | 2019 |
cggh/scikit-allel: v1.3.8 A Miles, MF Rodrigues, P Ralph, J Kelleher, M Schelker, R Pisupati, ... https://doi.org/10.5281/zenodo.10876220, 2024 | 68* | 2024 |
Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations ME Lauterbur, MIA Cavassim, AL Gladstein, G Gower, NS Pope, ... eLife 12, RP84874, 2023 | 30 | 2023 |
Clinal and seasonal changes are correlated in Drosophila melanogaster natural populations MF Rodrigues, MD Vibranovski, R Cogni Evolution 75 (8), 2042-2054, 2021 | 14* | 2021 |
Shared evolutionary processes shape landscapes of genomic variation in the great apes MF Rodrigues, AD Kern, PL Ralph Genetics 226 (4), iyae006, 2024 | 5 | 2024 |
Efficient ancestry and mutation simulation with msprime 1.0. Genetics 220, iyab229 F Baumdicker, G Bisschop, D Goldstein, G Gower, AP Ragsdale, ... | 5 | 2022 |
Genomic Responses to Climate Change: Making the Most of the Drosophila Model MF Rodrigues, R Cogni Frontiers in Genetics 12, 676218, 2021 | 5 | 2021 |
Neofunctionalization driven by positive selection led to the retention of the loqs2 gene encoding an Aedes specific dsRNA binding protein CF Estevez-Castro, MF Rodrigues, A Babarit, FV Ferreira, EG de Andrade, ... BMC Biology 22 (1), 14, 2024 | 4 | 2024 |
Adaptive or neutral clines? Integrating genome-wide clinal and seasonal variation to infer natural selection in Drosophila melanogaster MF Rodrigues Universidade de São Paulo, 2018 | | 2018 |