Next-generation sequencing and bioinformatics protocol for malaria drug resistance marker surveillance E Talundzic, S Ravishankar, J Kelley, D Patel, M Plucinski, S Schmedes, ... Antimicrobial Agents and Chemotherapy 62 (4), 10.1128/aac. 02474-17, 2018 | 71 | 2018 |
TLR-exosomes exhibit distinct kinetics and effector function S Srinivasan, M Su, S Ravishankar, J Moore, PS Head, JB Dixon, ... Scientific Reports 7 (1), 41623, 2017 | 31 | 2017 |
Mapping-free variant calling using haplotype reconstruction from k-mer frequencies PA Audano, S Ravishankar, FO Vannberg Bioinformatics 34 (10), 1659-1665, 2018 | 29 | 2018 |
RNA helicase, DDX3X, is actively recruited to sites of DNA damage in live cells MJ Cargill, A Morales, S Ravishankar, EH Warren DNA repair 103, 103137, 2021 | 22 | 2021 |
Evolution and Genetic Diversity of the k13 Gene Associated with Artemisinin Delayed Parasite Clearance in Plasmodium falciparum MA Pacheco, ER Kadakia, Z Chaudhary, DJ Perkins, J Kelley, ... Antimicrobial agents and chemotherapy 63 (8), 10.1128/aac. 02550-18, 2019 | 19 | 2019 |
Targeted deep amplicon sequencing of antimalarial resistance markers in Plasmodium falciparum isolates from Cameroon M L’Episcopia, J Kelley, BGD Dongho, D Patel, S Schmedes, ... International Journal of Infectious Diseases 107, 234-241, 2021 | 18 | 2021 |
First Full Draft Genome Sequence of Plasmodium brasilianum E Talundzic, S Ravishankar, V Nayak, DS Patel, C Olsen, M Sheth, ... Genome Announcements 5 (6), 10.1128/genomea. 01566-16, 2017 | 16 | 2017 |
Class II HLA-DRB4 is a predictive biomarker for survival following immunotherapy in metastatic non-small cell lung cancer CY Jiang, L Zhao, MD Green, S Ravishankar, AMH Towlerton, AJ Scott, ... Scientific reports 14 (1), 345, 2024 | 8 | 2024 |
The first complete genome of the simian malaria parasite Plasmodium brasilianum M Bajic, S Ravishankar, M Sheth, LA Rowe, MA Pacheco, DS Patel, ... Scientific Reports 12 (1), 19802, 2022 | 8 | 2022 |
Xomannotate: analysis of heterogeneous and complex exome-a step towards translational medicine AK Talukder, S Ravishankar, K Sasmal, S Gandham, J Prabhukumar, ... PLoS One 10 (4), e0123569, 2015 | 8 | 2015 |
Serial analysis of the T-cell receptor β-chain repertoire in people living with HIV reveals incomplete recovery after long-term antiretroviral therapy AMH Towlerton, S Ravishankar, DG Coffey, CE Puronen, EH Warren Frontiers in immunology 13, 879190, 2022 | 7 | 2022 |
Geographic EBV variants confound disease-specific variant interpretation and predict variable immune therapy responses EL Briercheck, S Ravishankar, EH Ahmed, CC Carías Alvarado, ... Blood Advances 8 (14), 3731-3744, 2024 | 5 | 2024 |
Role of HLA-DRB4 as a biomarker for endocrine toxicity and survival outcomes after immunotherapy in metastatic non-small cell lung cancer. C Jiang, S Ravishankar, L Zhao, M Green, A Towlerton, A Scott, ... Journal of Clinical Oncology 41 (16_suppl), e21005-e21005, 2023 | 1 | 2023 |
The signature of a T-cell response to KSHV persists across space and time in individuals with epidemic and endemic KS from Uganda S Ravishankar, AMH Towlerton, P Mooka, J Kafeero, DG Coffey, ... bioRxiv, 2024 | | 2024 |
Genetic epidemiology algorithms for tracking drug resistance variants and genomic clustering of plasmodium species S Ravishankar Georgia Institute of Technology, 2019 | | 2019 |
Next-generation Sequence-analysis Toolkit (NeST): A standardized bioinformatics framework for analyzing Single Nucleotide Polymorphisms in next-generation sequencing data S Ravishankar, SE Schmedes, DS Patel, M Plucinski, V Udhayakumar, ... bioRxiv, 323535, 2018 | | 2018 |
TARGETED DEEP AMPLICON SEQUENCING ANALYSIS OF KELCH 13 AND CYTOCHROME B GENES IN PLASMODIUM FALCIPARUM ISOLATES FROM … M L'Episcopia, M Menegon, C Severini, A Nurahmed, A Talha, B Nour, ... AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE 99 (4), 534-534, 2018 | | 2018 |
First full draft genome sequence of Plasmodium brasilianum. Genome Announc 5: e01566-16 E Talundzic, S Ravishankar, V Nayak, DS Patel, C Olsen, M Sheth, ... | | 2017 |
Mapping-free variant calling using haplotype reconstruction from k-mer frequencies Supplementary material P Audano, S Ravishankar, F Vannberg | | |